Mohd Firdaus Raih
@MFirdausRaih
Bioinformatics, Computational Structural Biology, Interesting'omics...
You might like
Our latest webserver integrates all our substructure searching webservers into a single interface - now in NAR GrAfSS: a webserver for substructure similarity searching and comparisons in the structures of proteins and RNA academic.oup.com/nar/advance-ar…
Delighted to announce our new method, A Computational Resource for Optimal Naming of anY Method, aka ACRONYM!
“AlphaFold predictions are valuable hypotheses, and accelerate but do not replace experimental structure determination” has been updated Spelling out explicitly how such predictions should fit into structural biology workflows biorxiv.org/content/10.110…
ISCB Academy 3D-SIG webinar - Substructural similarity searching: having more fun(ctions) with increasing biological structure data youtu.be/a59_zU6J-7M Substructure searches for function annotation of AlphaFold computed structure models.
youtube.com
YouTube
Substructural similarity searching... - Mohd Firdaus Raih - Hosted by...
PDB Reaches a New Milestone: 200,000+ Entries With this week’s update, the PDB contains more than 200,000 entries wwpdb.org/news/news?year… @PDBeurope @PDBj_en @PDBj_ja
In German the word “Verschlimmbessern” means “to make something worse while repairing it.” In English we call that “software development.”
the iconic “I discovered an antibiotic that will still be quite useful a century from now” pose
Did you know BACITRACIN was named by Balbina Johnson, lab supervisor at Columbia Med School, since the producing (Baci)llus was isolated from compound fracture of a child Margaret (Trac)y where it was (in)hibiting pathogenic bacteria and helping her overcoming septic infection?
One of the most iconic #PDB50structures is the ribosome, the molecular machine responsible for protein production, which earned Ramakrishnan, Steitz and Yonath the 2009 Nobel Prize in Chemistry. View the bacterial ribosome: PDBe.org/7k00/3d
when building MEM-108 Fab, I could actually “see” some side chains in CDRs, such as a big most-likely-Trp and bumpy Pro. I chose not to build them, since there was say ~1% chance that my eyes were wrong. There may be similar cases around with natural samples. What would you do?
goodreads.com/book/show/5812… "A Consequence of Sequence" - published by Penguin Random House is now available for pre-order and should be available worldwide from 11 August 2021... and it's not a bioinformatics textbook, in case you were wondering.
bit.ly/3igcvqH "A Consequence of Sequence" - published by Penguin Random House is now available for pre-order and should be available worldwide from 11 August 2021... and it's not a bioinformatics textbook, in case you were wondering.
All databases of TREND trend.zhulinlab.org are updated to the latest version. In addition, the RfaH HMM profile (mbio.asm.org/content/11/5/e…) is available only in TREND under Pfam 34+MiST+TREND option of HMMER3 algorithm. #Bioinformatics #Pfam #CDD #domains
We frequently laud scientists based on the numbers of papers they’ve published and h-indices. This makes me curious. When you hear of someone publishing >50 papers a year, what is your first instinct/assumption? Is it mad respect? Or something else?
Brief update on some exciting progress on #AlphaFold! We’ve been heads down working flat out on our full methods paper (currently under review) with accompanying open source code and on providing broad free access to AlphaFold for the scientific community. More very soon!
Comment from a reviewer: "..."...Most likely, there is some difference in XXXX, but there is no need to explain this difference, weird stuff happens with RNA all the time..." - wished more reviewers appreciate that weird stuff happens with RNA all the time a lot more...
United States Trends
- 1. Good Wednesday 22.9K posts
- 2. #hazbinhotelseason2 39K posts
- 3. PancakeSwap BNB Chain 2,250 posts
- 4. #wednesdaymotivation 3,385 posts
- 5. ADOR 54.5K posts
- 6. Hump Day 9,571 posts
- 7. #Wednesdayvibe 1,733 posts
- 8. Happy Hump 5,893 posts
- 9. USDT 114K posts
- 10. Northern Lights 50.8K posts
- 11. #HazbinHotelSpoilers 4,409 posts
- 12. #huskerdust 10.3K posts
- 13. Hanni 15.6K posts
- 14. StandX 2,519 posts
- 15. Vaggie 7,889 posts
- 16. MIND-BLOWING 34.3K posts
- 17. Jack Schlossberg 2,241 posts
- 18. Wike 253K posts
- 19. H-1B 44.1K posts
- 20. SPECTACULAR 25.8K posts
You might like
-
OSU Center for RNA Biology
@OSU_RNA -
Ammar_Ahmedani
@AhmedaniAmmar -
Lin Huang 黄林
@LinHuang2008 -
Danny IncaRNAto
@incaRNAtolab -
Jinwei Zhang Lab
@jinweizhang -
Beaudoin lab
@JeanDenisB35 -
Gang CHEN
@ChenRNAChen -
David Kuster
@RNADavid -
Xianzhi.Lin_RNA Biology
@AndrewlinB -
Sri Devan Appasamy
@sri_devan -
G Aquino-Jarquin
@GAquinoJ -
Dmitri Ermolenko
@DmitriErmolenko -
Angelika Andrzejewska-Romanowska
@aandrzejewskaa
Something went wrong.
Something went wrong.