gmodproject's profile picture. The Generic Model Organism Database project: open-source software for genome-scale biological data.

The Tweet Of GMOD

@gmodproject

The Generic Model Organism Database project: open-source software for genome-scale biological data.

The Tweet Of GMOD reposted

Frontend Developer position Required to apply @ usajobs.gov/job/771349000 -Responsible for designing, developing, testing, & debugging responsive web applications -Using #javascript , HTML, CSS, GitHub, Jekyll & Liquid #JobOpening #Hybrid #FrontEndDeveloper


#JBrowse2 workshop about to start at #pag31 in town and country D. Get some updates and a hands on tutorial for setting up your own JBrowse 2!


The Tweet Of GMOD reposted

Did you know that you could get variant analysis, methylation and phasing in a single data analysis workflow? #EPI2ME human variation workflow, best practice @nanopore data analysis, with great reports and integrated genome browser. #nanoporeconf

gamba_cristina's tweet image. Did you know that you could get variant analysis, methylation and phasing in a single data analysis workflow? #EPI2ME human variation workflow, best practice @nanopore data analysis, with great reports and integrated genome browser. #nanoporeconf
gamba_cristina's tweet image. Did you know that you could get variant analysis, methylation and phasing in a single data analysis workflow? #EPI2ME human variation workflow, best practice @nanopore data analysis, with great reports and integrated genome browser. #nanoporeconf

The Tweet Of GMOD reposted

The application even includes jbrowse2 for no fuss viewing of read alignments straight. Analysis a manual review in a single application. jbrowse.org/jb2/

jbrowse.org

JBrowse

JBrowse


The Tweet Of GMOD reposted

During the #Soybean Breeders Workshop the SoyBase team asked the workshop attendees to vote for their favorite SoyBase.org tool. The word cloud was created from the community's votes. #soybeans #plantbreeding #research #GenomeBrowser #BLAST

SoyBaseDatabase's tweet image. During the #Soybean Breeders Workshop the SoyBase team asked the workshop attendees to vote for their favorite SoyBase.org tool. The word cloud was created from the community's votes.
#soybeans #plantbreeding #research #GenomeBrowser #BLAST

It's that time again: I'm going to start bugging people for letters of support for the @usejbrowse project. If you have time and are a #JBrowse user, please consider writing a letter. JBrowse is a big part of many genomics projects, and we want to make sure it continues to grow.


My friends at CIRAD Montpellier, France are looking for bioinformatics web developer familiar with #GMOD tools (@TripalProject @galaxyproject, @usejbrowse) to work on a rubber and palm tree genome project: recrutement.cirad.fr/job/emploi-ing…


To go along with the #JBrowse2 tutorial at #PAG30, we also have three talks by JBrowse folks: @rbuels gave an intro: youtu.be/oxdhe_ZLGYs @cmdcolin gave an overview of features: youtu.be/jl0BzcBhGqk Caroline Bridge talked about the plugins: youtu.be/hJmV97odZ1w

gmodproject's tweet card. JBrowse 2 plugins

youtube.com

YouTube

JBrowse 2 plugins


At #PAG30 earlier this month, we presented a hands on #JBrowse2 tutorial, where the attendees logged into a server, ran through setting up a JBrowse 2 instance and added a lot of data, including #synteny and #structuralVariation gmod.org/wiki/JBrowse2_…


#GMOD at #PAG today: #JBrowse workshop 1:30 in T&C D (including hands on tutorial), #JBrowse from an implementer's perspective in Next Gen Annotation in Pacific E at 4:20 (blaze!)


The Tweet Of GMOD reposted

Also available in #bioconda :-) Thanks @usejbrowse team!

JBrowse v2.2.0 released, featuring alignments track performance improvements, totally revamped documentation on our website, and lazy loading of assemblies allowing improved scalability for loading many genomes in a single config! See release notes: jbrowse.org/jb2/blog/2022/…

usejbrowse's tweet image. JBrowse v2.2.0 released, featuring alignments track performance improvements, totally revamped documentation on our website, and lazy loading of assemblies allowing improved scalability for loading many genomes in a single config! See release notes: jbrowse.org/jb2/blog/2022/…
usejbrowse's tweet image. JBrowse v2.2.0 released, featuring alignments track performance improvements, totally revamped documentation on our website, and lazy loading of assemblies allowing improved scalability for loading many genomes in a single config! See release notes: jbrowse.org/jb2/blog/2022/…


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