#linkml resultados da pesquisa
Awesome week last week representing both @napari_imaging and #SpatialData @scverse at @EuroSciPy2024. It was great to meet maintainers and contributors to the libraries we use. Also grateful for the opportunity to have a flashlight talk on #numpydantic and a little bit on #LinkML
Join us on March 12, 3PM ET for a talk given by @SierraMoxon on #LinkML and #DataIntegration @ESIPfed Zoom link available on ESIP community calendar: esipfed.org/get-involved/c…
NMDC team member @MarkAMi36714448 will speak about implementing the MIxS standard into LinkML on Aug. 10 from 9:45 AM – 10:00 AM THA during the @genomestandards Annual Meeting, SiMR Room 101 (Siriraj Hospital Mahidol University) buff.ly/3YmnxOm #datascience #LinkML
#LinkML data schema language can unify at #typelevel across technical data schemas and refine with semantics Think of it as polyglot for data schemas and API supporter @linkml_data #datagovernance #datacontracts #datafabric
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
imho #LinkML is better
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
To note, #numpydantic is not my own work but work by the great @json_dirs and #LinkML is led by @chrismungall with many nice folks contributing. Do check out the repos if #FAIR data interests you!
Thoughts on #LinkML to rule them all
Take (thread) I think it is necessary to have #typelevel (schema) #datalineage across tech, languages, ML workflows ("data pipelines") + bring closer #dataengineering and #datagovernance in order to realize #ResponsibleAI And #LinkML is uniquely suited
Have a LinkML feature request? Interested in tutorials? Eager to share your LinkML model or use case with the community? Join our next monthly community meeting on April 20 at 11am ET. Subscribe to groups.google.com/g/linkml-commu… for meeting info! #LinkML #TeamScience #DataModel
Free BOSC/Bio-Ontologies ISCBacademy webinar Oct 3 @ 15:00 UTC: @SierraMoxon, “LinkML: an open data modeling framework, grounded with ontologies”. open-bio.org/2023/09/18/isc… #LinkML #OpenData #Ontologies
#ApacheArrow to unify runtime And #LinkML to unify data schemas and refine with semantics.
Some long form thoughts on composable data management systems (and @ApacheArrow, @pandas_dev, and more) on the heels of VLDB 2023 (also migrated my blog to @quarto_pub!): wesmckinney.com/blog/looking-b…
But not sure the impl is best we can do For data lineage across technologies, data schema dialects and to code we can use #LinkML (thread 👇) Enables delayed conversion to RDF (as a side effect of data schema / data format separation)
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
Would be great to combine with #LinkML data schema. It has semantics (augment technical data schemas) which can capture domain constraints declaratively.
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
LinkML community meeting on May 18 at 11am ET! Please join us to hear about schema-driven data collection tools like CEDAR (John Graybeal, @jgmetadata) & DataHarmonizer (Damion Dooley, @synapticlove). Agenda: bit.ly/linkml-communi… #LinkML #TeamScience #Collaboration #DataModel
+ To explain data coming out of models we need to understand semantics of data as it evolves throughout the lifecycle and orchestrations to decision making Current state of art lacks a unifying schema with semantics #LinkML goes a long way #DataGovernance
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
With #LinkML @linkml_data we can have both Uses a generative approach to derive the code artifacts and bridge to the heterogeneous ecosystem of frameworks, schema dialects and #programmingmodel-s and languages. cc @debasishg
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
Recap could be retrofit. Complementary with #LinkML We really need data schema management to do #DataGovernance in code and #FeatureStore / #FeatureRegistry as well as to define #DataContract-s
Recap belongs refactored under #LinkML generational approach to various schema dialects, programming languages (has binding to Pydantic) Also has semantic "refinements" to #SemanticWeb; no need for RDF data coversion See all thread and orignal page
The next #LinkML community meeting is on June 15 at 11am ET. James Overton will present Nanobot (web UI) + VALVE (table/database/validation layer). Agenda: bit.ly/linkml-communi…
And #LinkML can help refine technical data schemas with semantics without forcing semantic data formats
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
To note, #numpydantic is not my own work but work by the great @json_dirs and #LinkML is led by @chrismungall with many nice folks contributing. Do check out the repos if #FAIR data interests you!
Awesome week last week representing both @napari_imaging and #SpatialData @scverse at @EuroSciPy2024. It was great to meet maintainers and contributors to the libraries we use. Also grateful for the opportunity to have a flashlight talk on #numpydantic and a little bit on #LinkML
#LinkML data schema language can unify at #typelevel across technical data schemas and refine with semantics Think of it as polyglot for data schemas and API supporter @linkml_data #datagovernance #datacontracts #datafabric
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
Join us on March 12, 3PM ET for a talk given by @SierraMoxon on #LinkML and #DataIntegration @ESIPfed Zoom link available on ESIP community calendar: esipfed.org/get-involved/c…
Free BOSC/Bio-Ontologies ISCBacademy webinar Oct 3 @ 15:00 UTC: @SierraMoxon, “LinkML: an open data modeling framework, grounded with ontologies”. open-bio.org/2023/09/18/isc… #LinkML #OpenData #Ontologies
#ApacheArrow to unify runtime And #LinkML to unify data schemas and refine with semantics.
Some long form thoughts on composable data management systems (and @ApacheArrow, @pandas_dev, and more) on the heels of VLDB 2023 (also migrated my blog to @quarto_pub!): wesmckinney.com/blog/looking-b…
With #LinkML @linkml_data we can have both Uses a generative approach to derive the code artifacts and bridge to the heterogeneous ecosystem of frameworks, schema dialects and #programmingmodel-s and languages. cc @debasishg
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
NMDC team member @MarkAMi36714448 will speak about implementing the MIxS standard into LinkML on Aug. 10 from 9:45 AM – 10:00 AM THA during the @genomestandards Annual Meeting, SiMR Room 101 (Siriraj Hospital Mahidol University) buff.ly/3YmnxOm #datascience #LinkML
Thoughts on #LinkML to rule them all
Take (thread) I think it is necessary to have #typelevel (schema) #datalineage across tech, languages, ML workflows ("data pipelines") + bring closer #dataengineering and #datagovernance in order to realize #ResponsibleAI And #LinkML is uniquely suited
But not sure the impl is best we can do For data lineage across technologies, data schema dialects and to code we can use #LinkML (thread 👇) Enables delayed conversion to RDF (as a side effect of data schema / data format separation)
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
"data lineage a first class concern" Agreed, exactly! We start with #LinkML for #typelevel #datalineage Generates framework/programming language specific schemas so we get lineage between meta and code + decoupling & unification across tech stacks
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
And #LinkML can help refine technical data schemas with semantics without forcing semantic data formats
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
Recap belongs refactored under #LinkML generational approach to various schema dialects, programming languages (has binding to Pydantic) Also has semantic "refinements" to #SemanticWeb; no need for RDF data coversion See all thread and orignal page
"Why should I use #LinkML over #ShEx/#SHACL?" "want your datamodel to work for non-#RDF representations such as JSON, YAML, and relational databases" linkml.io/linkml/faq/why… #SmartData abstracts over data formats; enables #typelevel lineage and comprehension #FeatureEngineering
imho #LinkML is better
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
+ To explain data coming out of models we need to understand semantics of data as it evolves throughout the lifecycle and orchestrations to decision making Current state of art lacks a unifying schema with semantics #LinkML goes a long way #DataGovernance
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
With #LinkML keep the data in efficient data formats and have the semantic "cake eaten too"
"Why should I use #LinkML over #ShEx/#SHACL?" "want your datamodel to work for non-#RDF representations such as JSON, YAML, and relational databases" linkml.io/linkml/faq/why… #SmartData abstracts over data formats; enables #typelevel lineage and comprehension #FeatureEngineering
NMDC team member @MarkAMi36714448 will speak about implementing the MIxS standard into LinkML on Aug. 10 from 9:45 AM – 10:00 AM THA during the @genomestandards Annual Meeting, SiMR Room 101 (Siriraj Hospital Mahidol University) buff.ly/3YmnxOm #datascience #LinkML
Awesome week last week representing both @napari_imaging and #SpatialData @scverse at @EuroSciPy2024. It was great to meet maintainers and contributors to the libraries we use. Also grateful for the opportunity to have a flashlight talk on #numpydantic and a little bit on #LinkML
Join us on March 12, 3PM ET for a talk given by @SierraMoxon on #LinkML and #DataIntegration @ESIPfed Zoom link available on ESIP community calendar: esipfed.org/get-involved/c…
"Why should I use #LinkML over SQL DDL?" "SQL DDL is not a great language for data dictionaries. There is a lack of standard ..." "LinkML .. to provide rich metadata about your fields" Can use generated DDL schemas in #datalakehouse and #featurestore (and #metricstore)
"Why should I use #LinkML over JSON-Schema?" To add polymorphism/inheritance and (actual) semantic #typelevel annotations to refine technical schema No value level "transformations: or "calculations" before having unifying schema with business semantics glossary.airbyte.com/term/semantic-…
Thoughts 🤔 1. #LinkML as semantic layer over technical data schemas linkml.io/linkml/schemas… linkml.io/linkml/generat… 2. data schema morphisms between Json schema, Avro schema, Parquet schema, Spark schema, Arrow schema, etc
Free BOSC/Bio-Ontologies ISCBacademy webinar Oct 3 @ 15:00 UTC: @SierraMoxon, “LinkML: an open data modeling framework, grounded with ontologies”. open-bio.org/2023/09/18/isc… #LinkML #OpenData #Ontologies
#LinkML and #SodaCL could be combined to specify #DataContract-s with a semantic layer, in a technology agnostic way 🤔 linkml.io/linkml/intro/o…… docs.soda.io/soda-cl/metric…… cc cc @linkml_data @Onehousehq @datahubproject #SmartData
"Why should I use #LinkML over #UML?" "LinkML has facilities for semantic modeling, not anticipated in #UML" and a formal mapping to UML Can enable better collaboration between #DataModelling, #DataEngineering and #FeatureEngineering for "data products" linkml.io/linkml/schemas…
#LinkML data schema language can unify at #typelevel across technical data schemas and refine with semantics Think of it as polyglot for data schemas and API supporter @linkml_data #datagovernance #datacontracts #datafabric
A #SemanticLayer needs a data schema language that can 1. subsume existing schema languages: json, avro, etc 2. abstract over data formats (delay conversions) 3. use a generative approach towards existing schema dialects, #GPL-s & frameworks linkml.io/linkml/faq/why… #SmartData
Let's propose demand use cases: #ML features datasets are reproducible have a data schema, semantic overlay 4 understanding (#LinkML); registered & discoverable in a #FeatureRegistry (#DataHub) "The next generation of Data Platforms is the Data Mesh"
"#Feathr is an abstraction layer that provides a common feature namespace for defining features and a common platform for computing, serving, and accessing them “by name” from #ML workflows" #FeatureEngineering #FeatureRegistry #FeatureStore #DSL (#MLOps last) #DataManagement
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