#spatialomics resultados de búsqueda

#SpatialOmics MCMICRO Multiple Choice Microscopy pipeline mcmicro.org Multi-channel whole-slide images▶️ Single-cell data BaSiC▶️Illumination correction ASHLAR-▶️Tile stitch & alignment Coreograph▶️TMA core detection UnMICST Cypository Ilastik S3segmenter▶️…

HaoYin20's tweet image. #SpatialOmics

MCMICRO
Multiple Choice Microscopy pipeline
mcmicro.org

Multi-channel whole-slide images▶️
Single-cell data

BaSiC▶️Illumination correction
ASHLAR-▶️Tile stitch & alignment
Coreograph▶️TMA core detection
UnMICST Cypository Ilastik S3segmenter▶️…

6/ We are excited to share this work with the community! Huge thanks to all collaborators and patients who made this possible. 💡 Check out the preprint for the full story: 👉 researchsquare.com/article/rs-769… #NSCLC #spatialomics @WesleyResearch @UQMedicine @pahospital @PARFoundation


Galaxy single-cell & spatial omics community update: Navigating new frontiers in 2025. #SingelCellOmics #SpatialOmics #Genomics #Bioinformatics #Training #Galaxy @CellGenomics cell.com/cell-genomics/…

jsantoyo's tweet image. Galaxy single-cell & spatial omics community update: Navigating new frontiers in 2025. #SingelCellOmics #SpatialOmics #Genomics #Bioinformatics #Training #Galaxy @CellGenomics 
cell.com/cell-genomics/…

🚀 Calling all early-career researchers in single-cell genomics and spatial biology! Abstract submissions are OPEN for the 2026 Gordon Research Seminar (GRS): Spatial Omics × AI/ML 🗓 May 9–10, 2026 | Les Diablerets, Switzerland grc.org/single-cell-ge… #SpatialOmics #AI #ML

yuqitan3's tweet image. 🚀 Calling all early-career researchers in single-cell genomics and spatial biology!

Abstract submissions are OPEN for the 2026 Gordon Research Seminar (GRS): Spatial Omics × AI/ML
🗓 May 9–10, 2026 | Les Diablerets, Switzerland
grc.org/single-cell-ge…

#SpatialOmics #AI #ML

🔬 Excited to share the publication "Integrating Spatial Omics and Deep Learning: Toward Predictive Models of Cardiomyocyte Differentiation Efficiency" 🔗brnw.ch/21wWNep #CardiacRegeneration #SpatialOmics #DeepLearning #GNN #RNN #PrecisionMedicine

Bioeng_MDPI's tweet image. 🔬 Excited to share the publication "Integrating Spatial Omics and Deep Learning: Toward Predictive Models of Cardiomyocyte Differentiation Efficiency"

 🔗brnw.ch/21wWNep

#CardiacRegeneration #SpatialOmics #DeepLearning #GNN #RNN #PrecisionMedicine

#SpatialOmics The Spatial Atlas of Human Anatomy (SAHA): A Multimodal Subcellular-Resolution Reference Across Human Organs 15 M cells 100 donors 10 organs Liver Pancreas Bone marrow Lymph node PBMC Prostate Stomach ILeum Colon Appendix CosMX 1k 6k WTA Xenium GeoMx RNAscope…

HaoYin20's tweet image. #SpatialOmics

The Spatial Atlas of Human Anatomy (SAHA): A Multimodal Subcellular-Resolution Reference Across Human Organs

15 M cells
100 donors
10 organs

Liver
Pancreas
Bone marrow
Lymph node
PBMC
Prostate
Stomach
ILeum
Colon
Appendix

CosMX 1k 6k WTA
Xenium
GeoMx
RNAscope…

#SpatialOmics #MyocardialInfarction #MolecularCartography 100-gene + #SeqIF 12-marker + #DeepVisualProteomics 4/24/49/96 h postMI🐭 Endocardial vWF mediates Mɸ infiltr Anti-vWF i.v. reduces Mɸ at endocardial, but not epicardial, core or border, zone, but causes infarct wall…

HaoYin20's tweet image. #SpatialOmics #MyocardialInfarction
#MolecularCartography 100-gene + #SeqIF 12-marker + #DeepVisualProteomics
4/24/49/96 h postMI🐭

Endocardial vWF mediates Mɸ infiltr
Anti-vWF i.v. reduces Mɸ  at endocardial, but not epicardial, core or border, zone, but causes infarct wall…

📢It’s now out in ⁦@NatureGenet⁩! 🎉Congratulations to our amazing team ⁦@Yibo_Dai⁩ ⁦@GreenLymphoLab⁩ and wonderful collaborators ⁦⁦@MDAndersonNews#SpatialOmics #TME #inflammatory niches 🌟Data & Code are publicly available nature.com/articles/s4158…


scBSP: A fast and accurate tool for identifying spatially variable features from high-resolution spatial omics data. #SpatialOmics #Bioinformatics 🧬 🖥️ academic.oup.com/bioinformatics…

jsantoyo's tweet image. scBSP: A fast and accurate tool for identifying spatially variable features from high-resolution spatial omics data. #SpatialOmics #Bioinformatics 🧬 🖥️ 
academic.oup.com/bioinformatics…

#SpatialOmics #ImagingMassSpec #SpatialTranscriptomics MISTy Multiview Intercellular SpaTial modeling framework bioconductor.org/packages/relea… View/spatial scale-specific feature interactions Intraview - same location (intra-to-multicellulat) Juxtaview - immediate neighborhood…

HaoYin20's tweet image. #SpatialOmics
#ImagingMassSpec #SpatialTranscriptomics

MISTy
Multiview Intercellular SpaTial modeling framework
bioconductor.org/packages/relea…

View/spatial scale-specific feature interactions
Intraview - same location (intra-to-multicellulat)
Juxtaview - immediate neighborhood…

STAMP Single-Cell Transcriptomics Analysis & Multimodal Profiling through Sequencing-free, Imaging-based #SpatialOmics system CosMx Xenium Single-cell suspension cytospinned to slides 100 ~ >1M cells ⏫cell capture ⏬doublets Able to identify ultra-rare cell population…

HaoYin20's tweet image. STAMP
Single-Cell Transcriptomics Analysis & Multimodal Profiling through Sequencing-free, Imaging-based #SpatialOmics system
CosMx
Xenium

Single-cell suspension cytospinned to slides

100 ~ >1M cells
⏫cell capture
⏬doublets
Able to identify ultra-rare cell population…

🔬 CZI Workshop at scverse 2025 🔬 Multimodal And Spatial Single Cell Data: From Data APIs to AI-driven Biological Discovery 🧵 @ChanZuckerberg #scverse2025 #SingleCell #SpatialOmics #CELLxGENE #VirtualCells #AIBiology

scverse_team's tweet image. 🔬 CZI Workshop at scverse 2025 🔬

Multimodal And Spatial Single Cell Data: From Data APIs to AI-driven Biological Discovery
🧵

@ChanZuckerberg 
#scverse2025 #SingleCell #SpatialOmics #CELLxGENE #VirtualCells #AIBiology

Excited to share that our latest article on #SpatialOmics in plant science is now published in @TrendsinBiotech — and featured on the cover! 🌱📘 This breakthrough approach maps molecules in plant tissues with precise spatial context, opening new doors for climate-smart,…

rajvarshney's tweet image. Excited to share that our latest article on #SpatialOmics in plant science is now published in @TrendsinBiotech  — and featured on the cover! 🌱📘

This breakthrough approach maps molecules in plant tissues with precise spatial context, opening new doors for climate-smart,…

Interested in learning how to use the latest #singlecell and #spatialomics computational tools? #foglive features four Live Demo sessions in which tool developers and #bioinformatics expert take you through how to use their latest tools. Register here: hubs.la/Q02QLjw80


We have two fantastic live roundtables at #foglive this week. Come and be part of the discussion at our digital event and learn how to benchmark #singlecell tools and how to advance you #spatialomics data. Register here: hubs.la/Q02QL6C20


Just a reminder of some of the sessions we have coming up for #foglive tomorrow and Thursday. Register by 1pm (BST) / 8am (EDT) to ensure you get access to the platform in time for the keynote panel. Registration is here: hubs.la/Q02QZ4lF0 #singlecell #spatialomics


Interested in #spatialomics technologies? Giorgia Battistoni (Research Associate, Cancer Research UK Cambridge Institute) will be at The Festival of Genomics and Biodata discussing the expanding spatial toolkit. Register now: hubs.la/Q02VPRmv0 #FOG2025

FLGenomics's tweet image. Interested in #spatialomics technologies? Giorgia Battistoni (Research Associate, Cancer Research UK Cambridge Institute) will be at The Festival of Genomics and Biodata discussing the expanding spatial toolkit. Register now: hubs.la/Q02VPRmv0 #FOG2025

🔬 Excited to share the publication "Integrating Spatial Omics and Deep Learning: Toward Predictive Models of Cardiomyocyte Differentiation Efficiency" 🔗brnw.ch/21wWNep #CardiacRegeneration #SpatialOmics #DeepLearning #GNN #RNN #PrecisionMedicine

Bioeng_MDPI's tweet image. 🔬 Excited to share the publication "Integrating Spatial Omics and Deep Learning: Toward Predictive Models of Cardiomyocyte Differentiation Efficiency"

 🔗brnw.ch/21wWNep

#CardiacRegeneration #SpatialOmics #DeepLearning #GNN #RNN #PrecisionMedicine

🚀 Calling all early-career researchers in single-cell genomics and spatial biology! Abstract submissions are OPEN for the 2026 Gordon Research Seminar (GRS): Spatial Omics × AI/ML 🗓 May 9–10, 2026 | Les Diablerets, Switzerland grc.org/single-cell-ge… #SpatialOmics #AI #ML

yuqitan3's tweet image. 🚀 Calling all early-career researchers in single-cell genomics and spatial biology!

Abstract submissions are OPEN for the 2026 Gordon Research Seminar (GRS): Spatial Omics × AI/ML
🗓 May 9–10, 2026 | Les Diablerets, Switzerland
grc.org/single-cell-ge…

#SpatialOmics #AI #ML

Weekly reads 20/10/25: "From aging clones to generative genomics: evolution meets AI in modern biology" open.substack.com/pub/behindtheb… #AIinBiology #SingleCell #SpatialOmics #MultiOmics #DrugDiscovery #Genomics #DeepLearning


We’re excited to join Biomarkers and Precision Medicine US 2025 in San Francisco! See how our spatial biology solutions advance biomarker discovery and precision medicine. Visit us at Booth 40. More info: fcld.ly/78zph0b #SpatialBiology #SpatialOmics #MultiplexImaging

LeicaMicro's tweet image. We’re excited to join Biomarkers and Precision Medicine US 2025 in San Francisco! See how our spatial biology solutions advance biomarker discovery and precision medicine. Visit us at Booth 40.
More info:  fcld.ly/78zph0b 

#SpatialBiology #SpatialOmics #MultiplexImaging

Galaxy single-cell & spatial omics community update: Navigating new frontiers in 2025. #SingelCellOmics #SpatialOmics #Genomics #Bioinformatics #Training #Galaxy @CellGenomics cell.com/cell-genomics/…

jsantoyo's tweet image. Galaxy single-cell & spatial omics community update: Navigating new frontiers in 2025. #SingelCellOmics #SpatialOmics #Genomics #Bioinformatics #Training #Galaxy @CellGenomics 
cell.com/cell-genomics/…

6/ We are excited to share this work with the community! Huge thanks to all collaborators and patients who made this possible. 💡 Check out the preprint for the full story: 👉 researchsquare.com/article/rs-769… #NSCLC #spatialomics @WesleyResearch @UQMedicine @pahospital @PARFoundation


Couldn’t be prouder of my friend Nacho for publishing his first preprint! 🎉 Multi-omics integration and batch correction using a modality-agnostic deep learning framework biorxiv.org/content/10.110… #SingleCell #SpatialOmics #DeepLearning


#SpatialOmics MCMICRO Multiple Choice Microscopy pipeline mcmicro.org Multi-channel whole-slide images▶️ Single-cell data BaSiC▶️Illumination correction ASHLAR-▶️Tile stitch & alignment Coreograph▶️TMA core detection UnMICST Cypository Ilastik S3segmenter▶️…

HaoYin20's tweet image. #SpatialOmics

MCMICRO
Multiple Choice Microscopy pipeline
mcmicro.org

Multi-channel whole-slide images▶️
Single-cell data

BaSiC▶️Illumination correction
ASHLAR-▶️Tile stitch & alignment
Coreograph▶️TMA core detection
UnMICST Cypository Ilastik S3segmenter▶️…

🚀 Calling all early-career researchers in single-cell genomics and spatial biology! Abstract submissions are OPEN for the 2026 Gordon Research Seminar (GRS): Spatial Omics × AI/ML 🗓 May 9–10, 2026 | Les Diablerets, Switzerland grc.org/single-cell-ge… #SpatialOmics #AI #ML

yuqitan3's tweet image. 🚀 Calling all early-career researchers in single-cell genomics and spatial biology!

Abstract submissions are OPEN for the 2026 Gordon Research Seminar (GRS): Spatial Omics × AI/ML
🗓 May 9–10, 2026 | Les Diablerets, Switzerland
grc.org/single-cell-ge…

#SpatialOmics #AI #ML

STAMP Single-Cell Transcriptomics Analysis & Multimodal Profiling through Sequencing-free, Imaging-based #SpatialOmics system CosMx Xenium Single-cell suspension cytospinned to slides 100 ~ >1M cells ⏫cell capture ⏬doublets Able to identify ultra-rare cell population…

HaoYin20's tweet image. STAMP
Single-Cell Transcriptomics Analysis & Multimodal Profiling through Sequencing-free, Imaging-based #SpatialOmics system
CosMx
Xenium

Single-cell suspension cytospinned to slides

100 ~ >1M cells
⏫cell capture
⏬doublets
Able to identify ultra-rare cell population…

#SpatialOmics The Spatial Atlas of Human Anatomy (SAHA): A Multimodal Subcellular-Resolution Reference Across Human Organs 15 M cells 100 donors 10 organs Liver Pancreas Bone marrow Lymph node PBMC Prostate Stomach ILeum Colon Appendix CosMX 1k 6k WTA Xenium GeoMx RNAscope…

HaoYin20's tweet image. #SpatialOmics

The Spatial Atlas of Human Anatomy (SAHA): A Multimodal Subcellular-Resolution Reference Across Human Organs

15 M cells
100 donors
10 organs

Liver
Pancreas
Bone marrow
Lymph node
PBMC
Prostate
Stomach
ILeum
Colon
Appendix

CosMX 1k 6k WTA
Xenium
GeoMx
RNAscope…

#SpatialOmics #ChronicLimbThreateningIschemia #Diabetes Anterior Tibial Artery #Amputation scRNAseq n=4 #SpatialTranscriptomics Visium n=4 #SpatialMetabolomics #ImagingMassSpec n=7 RCTD integrates scRNA with Visium (wish a better interpretation of spatially-resolved arterial…

HaoYin20's tweet image. #SpatialOmics #ChronicLimbThreateningIschemia #Diabetes

Anterior Tibial Artery #Amputation
scRNAseq n=4
#SpatialTranscriptomics Visium n=4
#SpatialMetabolomics #ImagingMassSpec n=7

RCTD integrates scRNA with Visium (wish a better interpretation of spatially-resolved arterial…

Mind blowing development in single cell mass spec proteomics!!! Impressive talk by Matthias @labs_mann at @VIBConferences #SpatialOmics conference!

RongFan8's tweet image. Mind blowing development in single cell mass spec proteomics!!! Impressive talk by Matthias @labs_mann at @VIBConferences #SpatialOmics conference!
RongFan8's tweet image. Mind blowing development in single cell mass spec proteomics!!! Impressive talk by Matthias @labs_mann at @VIBConferences #SpatialOmics conference!

scBSP: A fast and accurate tool for identifying spatially variable features from high-resolution spatial omics data. #SpatialOmics #Bioinformatics 🧬 🖥️ academic.oup.com/bioinformatics…

jsantoyo's tweet image. scBSP: A fast and accurate tool for identifying spatially variable features from high-resolution spatial omics data. #SpatialOmics #Bioinformatics 🧬 🖥️ 
academic.oup.com/bioinformatics…

Happy to have contributed to this Voices piece on 'The impact of multi-omics in medicine' and sharing my views. " Thank you @CellRepMed editor Dr. Elisa Panada for this opportunity! #SpatialOmics @MDAndersonNews Read more here: cell.com/cell-reports-m…

IamLinghua's tweet image. Happy to have contributed to this Voices piece on 'The impact of multi-omics in medicine' and sharing my views. " 
Thank you @CellRepMed editor Dr. Elisa Panada for this opportunity! #SpatialOmics
@MDAndersonNews 
Read more here: cell.com/cell-reports-m…

A presentation on the new @curiobio SEEKER for #spatialomics. A tile of the size 3x3mm now, but 10x10mm coming.

AlbertVilella's tweet image. A presentation on the new @curiobio SEEKER for #spatialomics. A tile of the size 3x3mm now, but 10x10mm coming.

🧐Interested in #SpatialOmics? ‼️‼️Registrations are now open for our 3-day course on Spatial Omics data analysis with R/Bioconductor in May: physalia-courses.org/courses-worksh… 🚀🚀Instructors: @steman_research & @LGMartelotto

Physacourses's tweet image. 🧐Interested in #SpatialOmics?

‼️‼️Registrations are now open for our 3-day course on Spatial Omics data analysis with R/Bioconductor in May: physalia-courses.org/courses-worksh…

🚀🚀Instructors: @steman_research & @LGMartelotto

Very happy to kick off this course on #SpatialOmics and #MultiplexedImageAnalysis with @DenisSchapiro Victor Perez and @miguelib93

Physacourses's tweet image. Very happy to kick off this course on #SpatialOmics and #MultiplexedImageAnalysis with @DenisSchapiro Victor Perez and @miguelib93

Mark your calendars for our exclusive webinar with Dr. Marco Vicari and Dr. Patrik Bjärterot, the masterminds behind groundbreaking work in spatial omics! Explore cutting-edge research in multimodal molecular analysis. Register: bit.ly/45XAKzo #SpatialOmics

us_hupo's tweet image. Mark your calendars for our exclusive webinar with Dr. Marco Vicari and Dr. Patrik Bjärterot, the masterminds behind groundbreaking work in spatial omics! Explore cutting-edge research in multimodal molecular analysis. Register: bit.ly/45XAKzo #SpatialOmics

The dawn of spatial omics | Science science.org/doi/10.1126/sc… #SpatialOmics

BioDecoded's tweet image. The dawn of spatial omics | Science
science.org/doi/10.1126/sc…

#SpatialOmics
BioDecoded's tweet image. The dawn of spatial omics | Science
science.org/doi/10.1126/sc…

#SpatialOmics
BioDecoded's tweet image. The dawn of spatial omics | Science
science.org/doi/10.1126/sc…

#SpatialOmics
BioDecoded's tweet image. The dawn of spatial omics | Science
science.org/doi/10.1126/sc…

#SpatialOmics

Up now: @LimbeckKat talking about the role of #topology in #SpatialOmics @Ytm2023. So cool! 😎

Pseudomanifold's tweet image. Up now: @LimbeckKat talking about the role of #topology in #SpatialOmics @Ytm2023.

So cool! 😎

Thrilled to team up with @aruthak and @Adv_Biology to edit a special issue focused on #SpatialOmics in #Oncology. Please reach out if interested in contributing. Submission deadline: 1/12/2026.

DrWilliamHwang's tweet image. Thrilled to team up with @aruthak and @Adv_Biology to edit a special issue focused on #SpatialOmics in #Oncology. Please reach out if interested in contributing. Submission deadline: 1/12/2026.

A huge thank you to @steman_research, @LGMartelotto, and everyone who joined us for the first edition of the #SpatialOmics course! 🎉 We hope you enjoyed the week and are now armed with valuable spatial-omics insights to propel your future research. 🌟🔬

Physacourses's tweet image. A huge thank you to @steman_research, @LGMartelotto, and everyone who joined us for the first edition of the #SpatialOmics course! 🎉 
We hope you enjoyed the week and are now armed with valuable spatial-omics insights to propel your future research. 🌟🔬

Galaxy single-cell & spatial omics community update: Navigating new frontiers in 2025. #SingelCellOmics #SpatialOmics #Genomics #Bioinformatics #Training #Galaxy @CellGenomics cell.com/cell-genomics/…

jsantoyo's tweet image. Galaxy single-cell & spatial omics community update: Navigating new frontiers in 2025. #SingelCellOmics #SpatialOmics #Genomics #Bioinformatics #Training #Galaxy @CellGenomics 
cell.com/cell-genomics/…

Student Success Alert! Innovation is driven by our hardworking, smart, and dedicated students. Happy to announce our students' awards in our lab! Congrats to: Mayar Allam Sandip Das Thaddeus M. Anirudh Sriram Neel Sarkar @CoulterBME @ahmetcoskun_lab #spatialomics

ahmetfcoskun's tweet image. Student Success Alert!

Innovation is driven by our hardworking, smart, and dedicated students.

Happy to announce our students' awards in our lab!

Congrats to:
Mayar Allam 
Sandip Das 
Thaddeus M. 
Anirudh Sriram 
Neel Sarkar 

@CoulterBME @ahmetcoskun_lab 

#spatialomics

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