#metabolicmodeling search results

Trans-Dimensional Diffusive Nested Sampling for Metabolic Network Inference brnw.ch/21wWa9q By Johann Fredrik Jadebeck et al. From the MaxEnt 2024 Conference #BayesianInference #MetabolicModeling #NestedSampling

ADDR 50 days' free access: Genome-scale metabolic modelling in antimicrobial pharmacology: Present and future. By Jian Li & coworkers @MonashUni @AustralianCRS #MachineLearning #MetabolicModeling #antimicrobial kwnsfk27.r.eu-west-1.awstrack.me/L0/https:%2F%2…

Thank you @CommsPhys for showcasing our image as the 'Featured Image' on the journal’s homepage! nature.com/commsphys/ nature.com/articles/s4200… @CnrNanotec|@TecnoMed_Puglia|@unisalento|@Bizkaia|@bham_uni|@PoliTOnews|@UdeLaHabana #MetabolicModeling #TME #SystemsBiology

📢New multidisciplinary collaborative paper! 🔬Diffusion-limited exchanges drive shifts in multicellular metabolism, overflow emerges as a collective, not cell-autonomous, trait. 📊Spatial modeling +statistical physics+single-cell flux data #MetabolicModeling #SystemsBiology #TME

💻 You can now access MitoMAMMAL! This model, formatted in SBML3 and implemented in Python, enables metabolic studies across human and mouse mitochondria. Find the code and data here: gitlab.com/habermann_lab/… #Bioinformatics #OpenScience #MetabolicModeling

Thrilled to share my latest preprint! 🚀 Dive into our findings on microbial ecology in the chicken gut. Using #MetabolicModeling, we uncover how the absence of keystone taxa leads to functional reorganization, with implications for #GutHealth🐔 biorxiv.org/content/10.110…

🔬 New paper alert! "dingo: a Python package for metabolic flux sampling" - Efficiently sample from the flux space of metabolic models with state-of-the-art algorithms! 🚀 doi.org/10.1093/bioadv… #MetabolicModeling #FluxSampling #Python @fisikopoulos @ryszzzzoppp

.@mSystemsJ published #BAL funded #Lyme research from ELA winner Dr. Pete Gwynne @TuftsMedSchool. He used #metabolicmodeling to predict 77 unique #drugtargets in B. burgdorferi providing a blueprint for future novel #Lymedisease drug development. ⤵️ bit.ly/3tvLuYb

🦠Cell-specific genome-scale metabolic modeling of SARS-CoV-2-infected lung to identify antiviral enzymes ➡️buff.ly/3tgJpiW #MetabolicModeling #Antiviral #LungBiology #SARSCoV2

It is coffee break ☕ time at #ISMBECCB2023. Got time tomorrow? Drop by my poster at C-416 and let's have a chat on metabolic modeling. Hoping to see you there! #MetabolicModeling"

AI-powered computational models can simulate metabolic processes and nutrient interactions, aiding in the optimization of dietary recommendations for specific health conditions and personalized nutrition interventions. #ArtificialIntelligence #MetabolicModeling

First keynote lecture by @ines_thiele @nuigalway: Digital human metabolic twins can be powerful tools to predict inherited metabolic diseases and to better diagnose #RareDisease patients! They can also be used to optimally design treatment. #Metabolism #MetabolicModeling

Overall, we expanded our understanding of macrophage activity in #ColorectalCancer using #MetabolicModeling and set up a fun pipeline to generate high-confidence genome-scale models and efficiently find key differences bt cell types/subtypes

Want to get useful and additional information from your WGS sequencing analysis? Follow theses workflows by @DOEKBase for genome annotation and #metabolicmodeling. Happy metabolic modeling.

Unlock metabolism's secrets with #ECMtool2.0 Compute elementary conversion modes faster and more efficiently than ever before and discover which compounds microbes can produce in what ratio Read more doi.org/10.1093/bioinf… & try it github.com/SystemsBioinfo… #metabolicmodeling

#MetabolicModeling community, I've been away for a while... Have an FBA model creating atoms (e.g. produces ATP without P in the predicted minimal medium). Can people remind me how this happens and how to solve? Any help welcome 🙏

Excited to share our work on the @Space_Station #microbiome where we use #metabolicmodeling approaches to unravel key interactions and decipher their nature🛰️🦠 Check out our findings here: doi.org/10.1186/s40168… @karthikraman @VenkatJPL @Nitin_NJC @Ceth_Parker @MicrobiomeJ

Innotargets ESRs in Metabolic Modeling workshop💻👨‍💻 #MSCA #metabolicmodeling #innotargets #phdlife #antimicrobialresistance #AcademicTwitter #AcademicChatter

Even with an optimized pathway, acetone selectivity remained low & we observed new unwanted products through interaction of the introduced pathway with native metabolism. Through #ComputationalBiology & #MetabolicModeling we identified 14 candidate enzymes

Excited to have this out! bit.ly/3bT8xAa #metabolicmodeling & in vitro studies of human CD4+ T-cell subsets reveal importance of ceramide pathways in Th17 differentiation and effector functions. @partho_phd @LahesmaaGroup @BioscienceTurku #lipidomics #immunometabolism

"#MetabolicModeling of Human #Gut #Microbiota on a #Genome Scale: An #Overview" by Partho Sen and Matej Orešič @matejoresic, 📌mdpi.com/2218-1989/9/2/… Another paper from Special Issue edited by @KatiHanhineva @jjjvanderhooft 📗bit.ly/2CRBlax

It's on! 😎 #MetabolicModeling #plantSEED #Florida

Trans-Dimensional Diffusive Nested Sampling for Metabolic Network Inference brnw.ch/21wWa9q By Johann Fredrik Jadebeck et al. From the MaxEnt 2024 Conference #BayesianInference #MetabolicModeling #NestedSampling

A lot of great information is being shared at this workshop! Dr. Hyun-Seob Song from @PNNLab is currently talking about his work in #metabolicmodeling. Proud to say he utilizes #KBase pipelines for his modeling! @PNNLscience

@LauraTreu, at #DiBioRetreat2024, talks about her contributions to the fields of #Machinelearning and #Metabolicmodeling in complex #communities. #Bacteria #microbiota #Omics #Metabolomics #transcriptomics

A new #Review paper: Improving #Bioenergy Crops through Dynamic #MetabolicModeling mdpi.com/2227-9717/5/4/…👏👏👏

Even with an optimized pathway, acetone selectivity remained low & we observed new unwanted products through interaction of the introduced pathway with native metabolism. Through #ComputationalBiology & #MetabolicModeling we identified 14 candidate enzymes

Read the recap of the last day of EMSL Summer School right here on metabolic modeling: bit.ly/2USqxFE #EMSLSummerSchool #metabolicmodeling @doescience @DOEKBase @PNNLab

Laptops are out as the interactive #KBase portion of the Microbial Modeling workshop is underway! Great hands-on learning experience here at #AGU18! #metabolicmodeling #workshops @theAGU

From #metabolicmodeling webinars to Help Desk, we recognize José Faria for his work. José receives awesome user comments like this: "your help has been tremendous...I appreciate your responses as they have been and continue to be helpful" Way to go @jplfaria! #AllAboutThatKBase

Innotargets ESRs in Metabolic Modeling workshop💻👨‍💻 #MSCA #metabolicmodeling #innotargets #phdlife #antimicrobialresistance #AcademicTwitter #AcademicChatter

Register for the Part 2 of the Educators Workshops! Join fellow educators in learning how to adapt concept workflows from the #KBase Educators Org to curriculum, including #metabolicmodeling! Sign up for Part 2 on Sept 8th 2021 @ 1pm ET / 10am PT here - lbnl.zoom.us/meeting/regist…

Catch the next #UNLAgroHort seminar TODAY ›› Rajib Saha, chemical & biomolecular @NebEngineering, will highlight how #metabolicmodeling & #omics data integration can attempt to explore some of the important questions in #plantbiology. 150 Keim or go.unl.edu/agrohortseminar #UNL

.@mSystemsJ published #BAL funded #Lyme research from ELA winner Dr. Pete Gwynne @TuftsMedSchool. He used #metabolicmodeling to predict 77 unique #drugtargets in B. burgdorferi providing a blueprint for future novel #Lymedisease drug development. ⤵️ bit.ly/3tvLuYb

Machine and deep learning meet genome-scale metabolic modeling | PLOS Computational Biology journals.plos.org/ploscompbiol/a… #MachineLearning #MetabolicModeling

The next #UNLAgroHort seminar 11/22 at 3:30pm ›› Rajib Saha, chemical & biomolecular @NebEngineering, will highlight how #metabolicmodeling & #omics data integration can attempt to explore some of the important questions in #plantbiology.150 Keim or go.unl.edu/agrohortseminar #UNL

🔬 New paper alert! "dingo: a Python package for metabolic flux sampling" - Efficiently sample from the flux space of metabolic models with state-of-the-art algorithms! 🚀 doi.org/10.1093/bioadv… #MetabolicModeling #FluxSampling #Python @fisikopoulos @ryszzzzoppp

It is coffee break ☕ time at #ISMBECCB2023. Got time tomorrow? Drop by my poster at C-416 and let's have a chat on metabolic modeling. Hoping to see you there! #MetabolicModeling"

ADDR 50 days' free access: Genome-scale metabolic modelling in antimicrobial pharmacology: Present and future. By Jian Li & coworkers @MonashUni @AustralianCRS #MachineLearning #MetabolicModeling #antimicrobial kwnsfk27.r.eu-west-1.awstrack.me/L0/https:%2F%2…

Thank you @CommsPhys for showcasing our image as the 'Featured Image' on the journal’s homepage! nature.com/commsphys/ nature.com/articles/s4200… @CnrNanotec|@TecnoMed_Puglia|@unisalento|@Bizkaia|@bham_uni|@PoliTOnews|@UdeLaHabana #MetabolicModeling #TME #SystemsBiology