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AdaFang_'s profile picture. PhD Student @Harvard | AI/ML for Chemical Biology | currently at @GoogleDeepMind

Ada Fang

@AdaFang_

PhD Student @Harvard | AI/ML for Chemical Biology | currently at @GoogleDeepMind

45Posts 4KFollowers 166Following
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AdaFang_'s profile picture.
Ada Fang
 @AdaFang_
Apr 9

Introducing ATOMICA 💫 A model to universally represent molecular interactions (for proteins, nucleic acids, small molecules, and ions) at an all-atom scale 🧵

AdaFang_'s tweet image. Introducing ATOMICA 💫 A model to universally represent molecular interactions (for proteins, nucleic acids, small molecules, and ions) at an all-atom scale 🧵
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AdaFang_'s profile picture.
Ada Fang
 @AdaFang_
Sep 11

Antibody loops are hard to model but crucial for antibody design. We show that introducing special tokens for these loops improves AI models 🚀. Our tokenizer, Igloo, learns multimodal tokens that capture sequence, structure, and similarity to other loops. Igloo can be used to:…

AdaFang_'s tweet image. Antibody loops are hard to model but crucial for antibody design. We show that introducing special tokens for these loops improves AI models 🚀. Our tokenizer, Igloo, learns multimodal tokens that capture sequence, structure, and similarity to other loops. Igloo can be used to:…
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AdaFang_'s profile picture.
Ada Fang
 @AdaFang_
Sep 4

I’ve joined @GoogleDeepMind as a Student Researcher working on AI and genomics in London 🧬🇬🇧

AdaFang_'s tweet image. I’ve joined @GoogleDeepMind as a Student Researcher working on AI and genomics in London 🧬🇬🇧
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AdaFang_'s profile picture.
Ada Fang
 @AdaFang_
Aug 23

⏰ We’ve extended the deadline! There is still 1 day left to submit to the AI for Science Workshop Paper and Dataset Proposal Competition. Great to see so many scientists engaging with the AI community and sending in their dataset ideas 🤝 #NeurIPS2025 @NeurIPSConf…

AdaFang_'s tweet image. ⏰ We’ve extended the deadline! There is still 1 day left to submit to the AI for Science Workshop Paper and Dataset Proposal Competition. Great to see so many scientists engaging with the AI community and sending in their dataset ideas 🤝 #NeurIPS2025 @NeurIPSConf…
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Ada Fang reposted
nc_frey's profile picture.
Nathan C. Frey
@nc_frey
Aug 7

The AI4Science workshop @NeurIPSConf is hosting a dataset proposal competition with a $10K USD prize pool! Submit a 2 page proposal for a dataset you'd like to create and why. Thanks to @AdaFang_ & the organizers for making this happen! More info and link below👇

nc_frey's tweet image. The AI4Science workshop @NeurIPSConf is hosting a dataset proposal competition with a $10K USD prize pool! Submit a 2 page proposal for a dataset you'd like to create and why. Thanks to @AdaFang_ & the organizers for making this happen! More info and link below👇
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Ada Fang reposted
KumarAGarg's profile picture.
Kumar Garg
 @KumarAGarg
Jul 25

NEW: We love a good ideation competition, and this is on a question that @tkalil2050 loves asking researchers: “what is your dream AI dataset that, if it existed, could underpin a technical breakthrough like AlphaFold.” Details:

AdaFang_'s profile picture. PhD Student @Harvard | AI/ML for Chemical Biology | currently at @GoogleDeepMind
Ada Fang
 @AdaFang_
Jul 23

Data is everything. We need more data to unlock the next scientific breakthroughs with AI. Here’s how we’re addressing this at NeurIPS. With a $10,000 prize pool to get it started. 🧵 @NeurIPSConf @AI_for_Science @RenPhil21 #NeurIPS2025

AdaFang_'s tweet image. Data is everything. We need more data to unlock the next scientific breakthroughs with AI. Here’s how we’re addressing this at NeurIPS. With a $10,000 prize pool to get it started. 🧵 @NeurIPSConf @AI_for_Science @RenPhil21 #NeurIPS2025
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AdaFang_'s profile picture.
Ada Fang
 @AdaFang_
Jul 16

Taking ATOMICA to the wetlab has been a lot of fun! Excited to announce in our updated preprint we validate predicted dark proteome binders to heme 🧪🧬 Thanks to Michael Desgagné, Bradley L. Pentelute, and Joseph Loscalzo!

marinkazitnik's profile picture. Associate Professor at Harvard | @Harvard @KempnerInst @broadinstitute @harvard_data | @ProjectTDC @AI_for_Science @ScientistTools
Marinka Zitnik
@marinkazitnik
Jul 16

Trained on 2M+ interaction complexes, ATOMICA learns atomic-to-molecular embeddings of interaction interfaces @AdaFang_ In the latest preprint: 🎯 Wetlab tests of AI predictions: Experimental validation confirms heme binding for 5 ATOMICA-predicted sites in uncharacterized…

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marinkazitnik's profile picture.
Marinka Zitnik
@marinkazitnik
Jul 9

🌍 Excited to open up our global evaluation of AI for drug decision-making and therapeutic reasoning @GaoShanghua Want to shape the future of therapeutic AI, from understanding existing medicines to developing new treatments for diseases with limited options? Start here:…

marinkazitnik's tweet image. 🌍 Excited to open up our global evaluation of AI for drug decision-making and therapeutic reasoning @GaoShanghua Want to shape the future of therapeutic AI, from understanding existing medicines to developing new treatments for diseases with limited options? Start here:…
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AdaFang_'s profile picture.
Ada Fang
 @AdaFang_
Jun 17

Want to learn more about ATOMICA? Join the Multiomics Reading Group this Wednesday at 11 am, where I will be sharing more about our preprint!

XinyuYuan402's profile picture. Transfer learning and generalization problems for representation learning, including different data modalities like knowledge graphs, protein sequences, etc.
Xinyu Yuan
 @XinyuYuan402
Jun 17

⏰20th Multiomics RG Talk by @AdaFang_ on this Wednesday 11am-12pm EST, Jun 18th Affiliation: Harvard University Talk: ATOMICA: Learning Universal Representations of Intermolecular Interactions Paper Link: biorxiv.org/content/10.110… Meeting Link: meet.google.com/bvv-fcdn-rxm

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AdaFang_'s profile picture.
Ada Fang
 @AdaFang_
May 29

Swapped the peace and quiet of Boston for the hustle and bustle of NYC🗽 I’m spending my summer at @PrescientDesign @genentech working on antibody design methods with AI 🧬 If you’re in NYC and want to chat about AI x biology feel free to DM me!

AdaFang_'s tweet image. Swapped the peace and quiet of Boston for the hustle and bustle of NYC🗽 I’m spending my summer at @PrescientDesign @genentech working on antibody design methods with AI 🧬 If you’re in NYC and want to chat about AI x biology feel free to DM me!
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Ada Fang reposted
KempnerInst's profile picture.
Kempner Institute at Harvard University
 @KempnerInst
Apr 30

New in the Kempner's Deeper Learning blog: @AdaFang_ and @marinkazitnik introduce ATOMICA, a geometric foundation model that enables reasoning about biological systems with atom-level precision. bit.ly/KempnerATOMICA #AI #ML #MedTech

KempnerInst's tweet card. ATOMICA is a representation learning model that captures intermolecular interactions across all molecular modalities—proteins, nucleic acids, small molecules, and ions. By learning universal repres...
ATOMICA: Learning Universal Representations of Molecular Interactions - Kempner Institute
Source: kempnerinstitute.harvard.edu
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