CosrLab's profile picture. Center for Omics Sciences @SanRaffaeleMI. Promoting multi-omics research to understand diseases development, diagnosis and cure. Tweets are our own view

COSR Lab

@CosrLab

Center for Omics Sciences @SanRaffaeleMI. Promoting multi-omics research to understand diseases development, diagnosis and cure. Tweets are our own view

Pinned

Discover how to reveal and harness CD39 for the treatment of #colorectalCancer and liver #metastases by engineered #Tcells reading our brilliant work recently published in @Gut_BMJ by Alessia Potenza, @balestrc @CosrLab @BoniniChiara and collaborators gut.bmj.com/content/early/…


COSR Lab reposted

🧬 "SurfR: Riding the wave of RNA-Seq data with a comprehensive Bioconductor package to identify Surface Protein Coding Genes" introduces SurfR, an R package enabling streamlined analysis of surface protein genes from #RNASeq data. Read more: doi.org/10.1093/bioadv… #DataAnalysis

BioinfoAdv's tweet image. 🧬 "SurfR: Riding the wave of RNA-Seq data with a comprehensive Bioconductor package to identify Surface Protein Coding Genes" introduces SurfR, an R package enabling streamlined analysis of surface protein genes from #RNASeq data. Read more: doi.org/10.1093/bioadv… #DataAnalysis…

COSR Lab reposted

💻 SurfR, a comprehensive R/Bioconductor package for surface protein gene analysis from RNA-Seq data, is available with source code, tutorials, and use cases on GitHub: github.com/auroramaurizio… #OpenSource #ComputationalBiology #GeneAnalysis


COSR Lab reposted

Happy to present our #spatialomics 🔍🗺️work on #esophageal cancer @EACRnews Genomics multiOmics and computational biology meeting! Great program, inspiring talks and good friends! GiuliaLopatrielllo GiuseppinaArbore @OSanraffaele @COSRLab #cosmx

aurora_maurizio's tweet image. Happy to present our #spatialomics 🔍🗺️work on #esophageal cancer @EACRnews Genomics multiOmics and computational biology meeting!  Great program, inspiring talks and good friends! GiuliaLopatrielllo GiuseppinaArbore @OSanraffaele @COSRLab #cosmx

COSR Lab reposted

Kudos to @ValentinaGiansa for this and thanks to all people involved! 👇👇👇 Scalable Integration of Multiomic Single Cell Data Using Generative Adversarial Networks academic.oup.com/bioinformatics…


COSR Lab reposted

Happy our SurfR package has been accepted in bioconductor! A a bioinformatics R package to surf the cells’ surfaceome starting from NGS data #bioinformatics #surfaceome #Rpackage @CosrLab @ASTascini @marcojmorelli github.com/auroramaurizio…

aurora_maurizio's tweet image. Happy our SurfR package has been accepted in bioconductor! A a bioinformatics R package to surf the cells’ surfaceome starting from NGS data #bioinformatics #surfaceome #Rpackage @CosrLab @ASTascini @marcojmorelli github.com/auroramaurizio…

COSR Lab reposted

Attention please! 📣Registration to the yearly event of our association @ERCinItaly are now OPEN! Register here: ercinitaly.eu/evento-ercinit… Be part of the Italian frontier research community!


Merry Christmas and happy new year from @CosrLab 🎅🎄⭐️🥂❄️ #Christmas2023

CosrLab's tweet image. Merry Christmas and happy new year from @CosrLab 🎅🎄⭐️🥂❄️ #Christmas2023
CosrLab's tweet image. Merry Christmas and happy new year from @CosrLab 🎅🎄⭐️🥂❄️ #Christmas2023

COSR Lab reposted

"This is an excellent study!" The rev said. Check out our peripheral #nerve #regeneration paper at authors.elsevier.com/c/1i5ab3BtfH5N… Congrats to the brilliant distinguished gentlemen Dario Bonanomi and Ganesh Bhat, dear @COSRLab colleagues @ilDepoMI and Santo Diprima, and all authors!


COSR Lab reposted

💥BIG PAPER ALERT💥 So excited to share our latest, out now @Nature! Here, we uncover a spatially confined interplay between subsets of IL-1b+ macrophages and tumor cells that fuels pathogenic inflammation in pancreatic cancer (1/n) nature.com/articles/s4158…


COSR Lab reposted

Join us at SR-TIGET in Milan! We are recruiting a PhD student to study how #telomeric damage contributes to defective #immunity as part of a fantastic international consortium @IMMERGE_MSCA_DN, a #MSCAction #DoctoralNetwork. @MyUniSR @Telethonitalia @SanRaffaeleMI. Apply below👇

📢@IMMERGE_MSCA_DN is a #MSCActions #DoctoralNetwork (DN) aiming to train a New Generation of Scientists in Europe in #immunology, #multiomics & #GeneEditing to fight against #PrimaryImmunodeficiencies We just opened the call! 📯 📯 📯 Find out more 🔎 👉immergeproject.eu

IMMERGE_MSCA_DN's tweet image. 📢@IMMERGE_MSCA_DN is a #MSCActions #DoctoralNetwork (DN) aiming to train a New Generation of Scientists in Europe in #immunology, #multiomics & #GeneEditing to fight against #PrimaryImmunodeficiencies

We just opened the call! 📯 📯 📯

Find out more 🔎
👉immergeproject.eu


COSR Lab reposted

36 datasets, 26 protocols, 1.7 million harmonized cells! First edition Human Neural Organoid Cell Atlas. Important work from @zhisong_he @josch_f Leander Dony @TreutleinLab @fabian_theis. Strong community effort @Sergiu_P_Pasca @GiorgiaQuadrato. #organoids @ETH_BSSE @IHB_Research

GrayCampLab's tweet image. 36 datasets, 26 protocols, 1.7 million harmonized cells! First edition Human Neural Organoid Cell Atlas. Important work from @zhisong_he @josch_f Leander Dony @TreutleinLab @fabian_theis. Strong community effort @Sergiu_P_Pasca @GiorgiaQuadrato. #organoids @ETH_BSSE @IHB_Research

COSR Lab reposted

Colorectal cancer: study of the tumor microenvironment opens up new possible immunotherapies. It has been demonstrated by researchers of the @sararaffaeleMI and UniSR, led by Chiara Bonino. Find out more : hubs.ly/Q023-2kk0

MyUniSR's tweet image. Colorectal cancer: study of the tumor microenvironment opens up new possible immunotherapies. It has been demonstrated by researchers of the @sararaffaeleMI and UniSR, led by Chiara Bonino. Find out more : hubs.ly/Q023-2kk0

COSR Lab reposted

Check out the paper featured on the cover of this month’s Cancer Research: Preexisting Immunity Drives the Response to Neoadjuvant #Chemotherapy in Esophageal #Adenocarcinoma, by Arbore et al. bit.ly/45U1GjX

CR_AACR's tweet image. Check out the paper featured on the cover of this month’s Cancer Research:
Preexisting Immunity Drives the Response to Neoadjuvant #Chemotherapy in Esophageal #Adenocarcinoma, by Arbore et al.
bit.ly/45U1GjX

COSR Lab reposted

Two papers characterizing the critical role of CD8+ T cell subsets in COVID vaccination and infection - now in @NatImmunol! * @EJohnWherry lab (@markmpainter): nature.com/articles/s4159… * Our collab. w/Dan Littman's lab (@Bingjie_Zhang_+Rabi Upadhyay): nature.com/articles/s4159…


COSR Lab reposted

Excited that veloVI is out @naturemethods! Led by @adamgayoso & @PhilippWeiler7 w awesome @YosefLab, we combine deep generative modeling with a mechanistic single-cell transcriptional model for better RNA velocity analysis with uncertainty quantification. nature.com/articles/s4159…

fabian_theis's tweet image. Excited that veloVI is out @naturemethods! Led by @adamgayoso & @PhilippWeiler7 w awesome @YosefLab, we combine deep generative modeling with a mechanistic single-cell transcriptional model for better RNA velocity analysis with uncertainty quantification. nature.com/articles/s4159…

COSR Lab reposted

Don’t miss this publication by @DCampolungo and Gabellini lab. Happy I had the chance to contribute to this incredible work unraveling DUX4-r role in acute lymphoblastic leukemia | @ScienceAdvances science.org/doi/10.1126/sc…


COSR Lab reposted

Acute lymphoblastic #leukemia is the most frequent tumor in childhood. Two studies from San Raffaele may help to identify further prognostic criteria earlier and better personalize treatments for this particular leukemic form. Read more: hubs.ly/Q022w06J0

MyUniSR's tweet image. Acute lymphoblastic #leukemia is the most frequent tumor in childhood.
Two studies from San Raffaele may help to identify further prognostic criteria earlier and better personalize treatments for this particular leukemic form.
Read more: hubs.ly/Q022w06J0

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