Ale Dávila-Barclay
@davilabarclay
Researcher @OneHealthUPCH | Pathogen Genomics, One Health, Zoonotic Diseases, AMR, Implementation Science
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Is the WHO priority pathogen list right? I doesn't include the most common bacterial causes of gastroenteritis or gastric cancer! ineosoxford.ox.ac.uk/news/ioi-scien…
"Thus, the static and cidal concepts are unrelated to inhibiting growth vs killing bacteria. Indeed, every single “static” antibiotic on the market today kills bacteria—there are no antibiotics that inhibit growth but do not kill". #IDXposts
"However,the concept of static/cidal antibiotics is neither complex nor context-dependent;it is rather a myth. Regrettably,this dogma continues to be raised in modern literature despite two fundamental flaws" Honored to contribute to this important letter led by 🌟 @BradSpellberg
We implore authors, peer reviewers, and journal editors to stop perpetuating the concept of static and cidal antibiotics, given the aforementioned evidence demonstrating it is a myth. #IDXposts journals.asm.org/doi/10.1128/aa…
Friendly reminder that many scientists need 5-6 hrs of uninterrupted lab time to get their experiments done. Something to think about before scheduling that mid-day event. Attending a lunch time seminar means either losing the experiment day or staying till 7-8 pm.
My first first-author paper has now been published! 📜doi.org/10.1099/mgen.0… @MicrobioSoc If you are interested in #campylobacter 🧫 #AMR 🧬and #Statisticalmodelling 📊 please have a read📚 Thank you to co-authors @Fran_Co001 @mbbonsall @MaidenLab & Margaret🙌 @OxfordBiology 1)
New paper! pubmed.ncbi.nlm.nih.gov/35952602/ Spot the Campy culture/qPCR positive chicken flocks with predominant variant, vs those that are culture/qPCR negative. We are still able to detect diverse variants at low quantities in these samples using parallel sequencing....
The human microbiota can undergo dramatic changes during different phases of life. This Review in @NatureRevMicro discusses the microbiota successions that occur from the cradle to the grave. go.nature.com/3oRTtcD
💩 What determines the engraftment success of donor microbes after Fecal Microbiota Transplantation? cell.com/cell-reports-m… Happy to see our #FMT paper out in @CellRepMed 🧵
Labs in LMICs, where disease burden is highest, face systemic challenges in conducting research. Global efforts are needed to overcome paywalls, customs regulations & lack of suppliers. 3 Sahas @shoedeepto @ChrfSaha discuss barriers in global science doi.org/10.7554/eLife.…
We use a lot of our own flow cells. So we have custom vending machines to store and dispense on demand.
Massive thank you to being able to co-found the amazing 2 years at @ChickenJClub🐔attendees👩💻, speakers🎙️and the admin team 🙌 Started as a casual journal club, and grew up to 250 members, 28 sessions, conference and social media channels🧬Thank you again to everybody involved 🙌
🚨I wrote about BA.5—the latest coronavirus variant to rise to dominance—and why it matters. This is an attempt to clearly lay out what we know about it, and to cut through the morass of misinformation that has already accumulated around it. 1/ theatlantic.com/health/archive…
Less than an hour till our final Journal Club session - we’re not crying you are… 😢 DM us for the Zoom link.
Tomorrow is the day - the LAST EVER Chicken Journal Club session 🐓 After 2 wonderful years, the CJC is closing it’s doors. We would like to say thank you to everyone who participated and contributed to the making of the CJC. Please join us at 2pm on Tuesday for the finale 🎉
I've been using Mendeley Desktop daily for years, & have an annotated library of thousands of pdfs. Today, I switched to Zotero. Here's a 🧵of tips on how to do this, if you're also tired of Elsevier's BS and want to make the switch w/minimal effort while maintaining workflow.
nature.com/articles/s4146… "A comprehensive resource for Bordetella genomic epidemiology and biodiversity studies" is now live on @NatureComms. Thank you @sylvainbrisse @vbouchezIP and colleagues, @keithajolley for this great collaboration.
Excited to preprint our work benchmarking the use of ONT-only assemblies for critical applied bacterial genomics tasks such as antimicrobial resistance (AMR) and virulence gene detection and typing, serotype prediction and cluster identification - doi.org/10.1101/2022.0… 1/6
We are excited to announce our final event of the term “Global Campylobacter.” 🗣 Come and join us on Tuesday 12th July at 2pm (BST) where we will hear from panelists about Campylobacter in their area of the world. Keep your eyes peeled for speaker announcements. 👀
Excited to share our review on phylodynamic models in @Virus_Evolution with @sebduchene, Tim Vaughan, and Joshua Zhang: bit.ly/391HCVf. (1/5)
OUT NOW👏A bottom-up view of antimicrobial resistance transmission in developing countries #AMR #OneHealth #publichealth A Review by Iruka Okeke & colleagues @iruka_okeke read it here👉rdcu.be/cOClo nature.com/articles/s4156…
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