DryLab Drop
@Dldbioscience
Daily bioinformatics tool drops, explained with clean visuals. 🧬 Genomics • AI • data science. Contact/submit: [email protected] #Bioinformatics #Genomics
🎁 FREE: Notion page with 50+ tools listing database and 10+ ready-to-run OMICS workflows. Learn bioinformatics and understand—or even run—your own analyses. 1-liner commands + gotchas inside. (Link in first reply) • Follow @DryLabDrop @dldbioscience for weekly micro-drops.
LM2Protein: A Structure-to-Token Protein Large Language Model 1. LM2Protein introduces a novel approach to integrate protein 3D structural data into a sequence processing framework by converting 3D coordinates into discrete structure tokens using a VQ-VAE-like network. This…
FADVI: disentangled representation learning for robust integration of single-cell and spatial omics data biorxiv.org/content/10.110…
GGANO: Reconstructing gene network structure and dynamics from single cell data academic.oup.com/bioinformatics…
Benchmarking large-scale single-cell RNA-seq analysis biorxiv.org/content/10.110…
MultiModalGraphics: an R package for graphical integration of multi-omics datasets bmcbioinformatics.biomedcentral.com/articles/10.11…
🧬 Just out in Bioinformatics Advances: “Unifying proteomic technologies with ProteinProjector.” Explore the full study: doi.org/10.1093/bioadv…
The cell as a token: high-dimensional geometry in language models and cell embeddings academic.oup.com/bioinformatics…
A plethora of Network Visualization Tools Details and Links here: linkedin.com/posts/milan-ja…
Gos: a declarative library for interactive genomics visualization in Python academic.oup.com/bioinformatics…
SVUPP: Pre-phasing long reads improves structural variant genotyping academic.oup.com/bioinformatics…
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