Yeimy González, PhD
@yeigg
Postdoctoral Researcher, Pontificia Universidad Javeriana
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Looking to visualize the distribution of a numeric variable across different categories in R? ggridges, an extension of ggplot2, makes it easy to create ridge plots, offering a clear and elegant way to compare distributions. ✔️ Effortlessly create ridge plots to visualize…
I recently discovered the tidyplots package in R, and it’s impressive how effortlessly it enables you to create beautiful, publication-ready plots. Designed with scientific papers in mind, tidyplots lets you build, adjust, and refine plot components gradually, all with a…
Human organoids as 3D in vitro platforms for drug discovery: opportunities and challenges nature.com/articles/s4157… This new Review by Clevers et al. discusses organoid generation methods and uses in preclinical drug discovery, as well as the regulatory and practical challenges
GraphComm predicts cell cell communication using a graph based deep learning method in single cell RNA sequencing data nature.com/articles/s4159…
Applications are now open for the Stanford course on neural #assembloids! Deadline: December 12
A simple guide to understanding how neurons make neurotransmitters Your brain has different classes of neurons, each defined by the chemical messenger (neurotransmitter) they release. These transmitters are built from specific precursors using unique enzymes and cofactors. 1️⃣…
The OBI Scholars Program is recruiting early career scientists of ANY discipline whose research includes mechanistic studies that advance understanding of CNS disease & aging. Scholars receive a generous ~$3M recruitment package and lab space. Learn more: apply.interfolio.com/174927
By popular demand — the next edition of our hands-on @Stanford @BrOrganogenesis course is coming in 2026! This year, the focus turns to neural #assembloids, reflecting the growing movement toward modeling circuit-level and complex cell-cell interactions in brain disease. The…
The emerging roles of long non-coding RNAs in the nervous system. #LongNonCodingRNA #NervousSystem #Genomics #NatureReviewsNeuroscience nature.com/articles/s4158…
Heatmap in ggplot2 yunuuuu.github.io/ggalign/index.… I always use complexheatmap, but this seems to be a good alternative if you want to stay within the ggplot
SeuratExtend: streamlining single-cell RNA-seq analysis through an integrated and intuitive framework. #SingleCell #scRNAseq #Bioinformatics @GigaScience academic.oup.com/gigascience/ar…
Benchmarking single-cell multi-modal data integrations👍 nature.com/articles/s4159…
New discoveries are reshaping how scientists understand the molecular connections between the extracellular matrix and lysosomes—and the resulting implications for research and therapeutics for neurodegenerative disorders. Learn more in this @SciSignal Review:…
For readers interested in GPCR drug discovery, here's a perspective on pharmacological characterization of GPCR modulators rdcu.be/esWfS and a review on functional dynamics studies revealing new approaches rdcu.be/esWgt
Epigenetic reprogramming as a strategy for treating neurodegeneration 🧠 tinyurl.com/ys4eh9yw
Here's a tutorial I wrote on how I design detection and cloning primers using Primer3. Hopefully it's helpful for students. 💚 binomicalabs.notion.site/PCR-Primer-Des…
Targeting protein disorder: the next hurdle in drug discovery nature.com/articles/s4157… Intrinsically disordered proteins are often dysregulated in disease, but have been considered ‘undruggable’. This new Review discusses approaches that could tackle this barrier
GeneChat: A Multi-Modal Large Language Model for Gene Function Prediction biorxiv.org/content/10.110…
Application of spatial transcriptomics across organoids: a high-resolution spatial whole-transcriptome benchmarking dataset biorxiv.org/content/10.110…
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