#directrnaseq search results
The new era of single-molecule RNA modification detection through nanopore base-calling models. #DirectRNAseq #RNAmodifications #Nanopore #Sequencing #BaseCalling #Genomics @nanopore nature.com/articles/s4158…
Establishing benchmarks for quantitative mapping of m6A by Nanopore Direct RNA Sequencing. #DirectRNAseq #Sequencing #RNAmodifications @nanopore biorxiv.org/content/10.110…
DirectRM: integrated detection of landscape and crosstalk between multiple RNA modifications using direct RNA sequencing. #DirectRNAseq #RNAmodifications @Nanopore #Sequencing @NatureComms nature.com/articles/s4146…
Establishing benchmarks for quantitative mapping of m6A by Nanopore Direct RNA Sequencing. #DirectRNAseq #RNAsequencing #RNAmodifications #m6A #Genomics #Bioinformatics @nanopore biorxiv.org/content/10.110…
FYI: BWA does not like uracil! Don't forget to "sed 's/U/T/g' rna.fastq" before aligning #directRNAseq data from #nanopore
Direct RNA sequencing in plants: practical applications and future perspectives. #DirectRNAseq #PlantGenomics #Review @MPlantPCom cell.com/plant-communic…
📢NGS EXPO 2025 出展中です 📍29日(水) 12:25～ ランチョンLS1 📍29日(水) 17:30～ ポスター発表P23 📍企業ブース №27 #ウルトラロングリード #DirectRNAseq ちょっと驚きの情報が手に入るかも！？😳 ぜひお立ち寄りください
NGS EXPO 2025の演題登録は8月31日までです。 演題を出して是非、無料で参加ください！ 今年は奈良に引っ越しして開催です。 場所：奈良県コンベンションセンター 日時：10月29日(水)~30日(木） HP: ngsexpo.jp/expo2025/index…
Now we have @monica_kehoe from Department of Primary Industries and Regional Development #nanoporeconf #directRNAseq
Retweeted Callum J.C Parr (@CallumJCParr): Exon splicing hundreds of nucleotides away influencing the length of polyA tail, even with same last exon/3UTR being used across the isoforms #directRNAseq #NanoporeConf
Detecting RNA modification using direct RNA sequencing: a systematic review. #DirectRNAseq #RNAmodificationPrediction #MethodsReview #TooldBenchmarking sciencedirect.com/science/articl…
Single-molecule direct RNA sequencing reveals the shaping of epitranscriptome across multiple species. #DirectRNAseq #Epitranscriptomics #SingleMoleculeSequencing #NanoporeSequencing @nanopore @NatureComms nature.com/articles/s4146…
Nanopore-based direct sequencing of RNA transcripts with ten different modified nucleotides reveals gaps in existing technology. #DirectRNAseq @Nanopore #Sequencing #RNAmodifications #G3 academic.oup.com/g3journal/adva…
academic.oup.com
Nanopore-based direct sequencing of RNA transcripts with 10 different modified nucleotides reveals...
Abstract. RNA undergoes complex posttranscriptional processing including chemical modifications of the nucleotides. The resultant-modified nucleotides are
Benchmarking of computational methods for m6A profiling with Nanopore direct RNA sequencing. #m6A @nanopore #DirectRNAseq @BriefingBioinfo academic.oup.com/bib/article/25…
Detection of m6A from direct RNA sequencing using a Multiple Instance Learning framework. #m6A #DirectRNASeq @nanopore #NeuralNetworks biorxiv.org/content/10.110…
We showed that viral-host chimeric RNAs are possible by analyzing #directRNAseq #SARSCoV2 data. Enabled by @GISAID, we identified putative host-derived insertions in circulating #SARSCoV2 variants. Published in @ASMicrobiology mSystems: doi.peek.link/2yZv
New Direct Nanopore Sequencing Method Expands Toolkit for RNA Structure Profiling. #DirectRNAseq @nanopore #sequencing @GenomeWeb genomeweb.com/sequencing/new…
genomeweb.com
New Direct Nanopore Sequencing Method Expands Toolkit for RNA Structure Profiling
SMS-seq combines structural probing with direct RNA nanopore sequencing, offering researchers a new way to study RNA structure at the single-molecule level.
Let's do it! 💪😎 #ont #nanopore #directRNAseq
Establishing benchmarks for quantitative mapping of m6A by Nanopore Direct RNA Sequencing. #DirectRNAseq #RNAsequencing #RNAmodifications #m6A #Genomics #Bioinformatics @nanopore biorxiv.org/content/10.110…
Establishing benchmarks for quantitative mapping of m6A by Nanopore Direct RNA Sequencing. #DirectRNAseq #Sequencing #RNAmodifications @nanopore biorxiv.org/content/10.110…
DirectRM: integrated detection of landscape and crosstalk between multiple RNA modifications using direct RNA sequencing. #DirectRNAseq #RNAmodifications @Nanopore #Sequencing @NatureComms nature.com/articles/s4146…
📢NGS EXPO 2025 出展中です 📍29日(水) 12:25～ ランチョンLS1 📍29日(水) 17:30～ ポスター発表P23 📍企業ブース №27 #ウルトラロングリード #DirectRNAseq ちょっと驚きの情報が手に入るかも！？😳 ぜひお立ち寄りください
NGS EXPO 2025の演題登録は8月31日までです。 演題を出して是非、無料で参加ください！ 今年は奈良に引っ越しして開催です。 場所：奈良県コンベンションセンター 日時：10月29日(水)~30日(木） HP: ngsexpo.jp/expo2025/index…
The new era of single-molecule RNA modification detection through nanopore base-calling models. #DirectRNAseq #RNAmodifications #Nanopore #Sequencing #BaseCalling #Genomics @nanopore nature.com/articles/s4158…
Single-molecule direct RNA sequencing reveals the shaping of epitranscriptome across multiple species. #DirectRNAseq #Epitranscriptomics #SingleMoleculeSequencing #NanoporeSequencing @nanopore @NatureComms nature.com/articles/s4146…
Combining Nanopore direct RNA sequencing with genetics and mass spectrometry for analysis of T-loop base modifications across 42 yeast tRNA isoacceptors. #tRNA #DirectRNAseq @nanopore #Sequencing @NAR_Open academic.oup.com/nar/advance-ar…
Deep learning and direct sequencing of labeled RNA captures transcriptome dynamics. #DirectRNAseq @nanopore #Sequencing #TranscriptomeDynamics #NARgenomicsAndBioinformatics academic.oup.com/nargab/article…
Direct RNA sequencing in plants: practical applications and future perspectives. #DirectRNAseq #PlantGenomics #Review @MPlantPCom cell.com/plant-communic…
Full-length direct RNA sequencing reveals extensive remodeling of RNA expression, processing and modification in aging Caenorhabditis elegans. #DirectRNAseq #RNAmodifications @nanopore #LongReads #sequencing @biorxivpreprint biorxiv.org/content/10.110…
Multicellular, IVT-derived, unmodified human transcriptome for nanopore-direct RNA analysis. #DirectRNAseq @nanopore #RNAmodifications #Sequencing @GigaScience gigabytejournal.com/articles/129
RNA m6A detection using raw current signals and basecalling errors from nanopore direct RNA sequencing reads. #DirectRNAseq #m6A @nanopore #Sequencing #Bioinformatics academic.oup.com/bioinformatics…
academic.oup.com
RNA m6A detection using raw current signals and basecalling errors from Nanopore direct RNA...
AbstractMotivation. Nanopore direct RNA sequencing (DRS) enables the detection of RNA N6-methyladenosine (m6A) without extra laboratory techniques. A numbe
Detecting m6A at single-molecular resolution via direct RNA sequencing and realistic training data. #m6A #DirectRNAseq #RNATrainingDataset @nanopore @NatureComms nature.com/articles/s4146…
nature.com
Detecting m6A at single-molecular resolution via direct RNA sequencing and realistic training data
Nature Communications - Direct RNA-seq offers the possibility to identify RNA modifications on single molecules. Here, the authors report on the synthesis of biologically realistic training data...
Biochemical-free enrichment or depletion of RNA classes in real-time during direct RNA sequencing with RISER. #DirectRNAseq @nanopore #Sequencing #RealTimeRNAdepletion @EduEyras @biorxivpreprint biorxiv.org/content/10.110…
Benchmarking of computational methods for m6A profiling with Nanopore direct RNA sequencing. #m6A @nanopore #DirectRNAseq @BriefingBioinfo academic.oup.com/bib/article/25…
De novo basecalling of m6A modifications at single molecule and single nucleotide resolution. #m6A #RNAmodification #DirectRNAseq @nanopore #sequencing @EvaMariaNovoa @biorxiv_bioinfo biorxiv.org/content/10.110…
Sequencing accuracy and systematic errors of nanopore direct RNA sequencing. #DirectRNAseq @nanopore #Sequencing @biorxivpreprint biorxiv.org/content/10.110…
Nanopore-based direct sequencing of RNA transcripts with ten different modified nucleotides reveals gaps in existing technology. #DirectRNAseq @Nanopore #Sequencing #RNAmodifications #G3 academic.oup.com/g3journal/adva…
academic.oup.com
Nanopore-based direct sequencing of RNA transcripts with 10 different modified nucleotides reveals...
Abstract. RNA undergoes complex posttranscriptional processing including chemical modifications of the nucleotides. The resultant-modified nucleotides are
Long-read direct RNA sequencing reveals epigenetic regulation of chimeric gene-transposon transcripts in Arabidopsis thaliana. #LongReads #DirectRNAseq #TransposonsTranscripts @NatureComms nature.com/articles/s4146…
nature.com
Long-read direct RNA sequencing reveals epigenetic regulation of chimeric gene-transposon transcr...
Nature Communications - Transposons can be co-transcribed with genes in plant genomes. Here, the authors show the global production of chimeric transposon-gene transcripts and their epigenetic...
DeepEdit: single-molecule detection and phasing of A-to-I RNA editing events using nanopore direct RNA sequencing. #RNAediting #DirectRNAseq #LongReads @nanopore #Sequencing @GenomeBiology genomebiology.biomedcentral.com/articles/10.11…
The new era of single-molecule RNA modification detection through nanopore base-calling models. #DirectRNAseq #RNAmodifications #Nanopore #Sequencing #BaseCalling #Genomics @nanopore nature.com/articles/s4158…
Establishing benchmarks for quantitative mapping of m6A by Nanopore Direct RNA Sequencing. #DirectRNAseq #Sequencing #RNAmodifications @nanopore biorxiv.org/content/10.110…
FYI: BWA does not like uracil! Don't forget to "sed 's/U/T/g' rna.fastq" before aligning #directRNAseq data from #nanopore
Direct RNA sequencing in plants: practical applications and future perspectives. #DirectRNAseq #PlantGenomics #Review @MPlantPCom cell.com/plant-communic…
DirectRM: integrated detection of landscape and crosstalk between multiple RNA modifications using direct RNA sequencing. #DirectRNAseq #RNAmodifications @Nanopore #Sequencing @NatureComms nature.com/articles/s4146…
Establishing benchmarks for quantitative mapping of m6A by Nanopore Direct RNA Sequencing. #DirectRNAseq #RNAsequencing #RNAmodifications #m6A #Genomics #Bioinformatics @nanopore biorxiv.org/content/10.110…
Single-molecule direct RNA sequencing reveals the shaping of epitranscriptome across multiple species. #DirectRNAseq #Epitranscriptomics #SingleMoleculeSequencing #NanoporeSequencing @nanopore @NatureComms nature.com/articles/s4146…
Now we have @monica_kehoe from Department of Primary Industries and Regional Development #nanoporeconf #directRNAseq
Retweeted Callum J.C Parr (@CallumJCParr): Exon splicing hundreds of nucleotides away influencing the length of polyA tail, even with same last exon/3UTR being used across the isoforms #directRNAseq #NanoporeConf
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