Adib Miraki
@Adib_m_
Crafting stories from sequences - Bioinformatician works at Sanger institute 🇬🇧
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🚀 Prophet v3 is out! AI that predicts how cells respond to genetic & chemical perturbations across readouts. Now scales to 1.9 M molecules + in vitro validation of melanoma-specific hits 🧬💊 📄 biorxiv.org/content/10.110… #AI #Biology #DeepLearning
🚀 Our new Science paper is out (w/ B DeMeo, D Burkhardt, A Shalek, M Cortes): science.org/doi/10.1126/sc… We show that active learning + transcriptomic perturbations can guide which exps to run next, boosting phenotypic hit rates >13x. AI not just predicting bio, but designing it.🔁
Congratulations @Yoshua_Bengio!! Possibly the first scientist with one million citations in the world. Crazy how fast the field has grown 🤯
We had our first-ever Lotfollahi Lab retreat. Science, fun, and a lot of laughter all at once! 🎉 Big shoutout to our amazing experimental team and collaborators for bringing so much energy and inspiration 🌲🧬
A student who truly understands F=ma can solve more novel problems than a Transformer that has memorized every physics textbook ever written.
AITHYRA Symposium #AIforLifeScience: One Cell at a Time—AI and the Single-Cell Revolution
ve started a tradition in the lab: making Tahchin (Persian saffron rice cake 😋) to celebrate every paper submission! This time, some of our PhD students joined in. Amazing job, everyone — lots of exciting science coming soon!”
The goal of a PhD is not to learn some facts or read a few papers or learn a bunch of techniques. The goal of a PhD is to learn independence, problem solving, how to finish things you start, resilience, & gain the ability to adapt & think creatively. Learning these things is hard
🚨Moving from Cambridge to Oxford! After my PhD at @sangerinstitute and @Cambridge_Uni I’m leaving Cambridge, which I called my second home to start as a Postdoc at @UniofOxford @MRC_WIMM in Sumana Sharma’s group ! Grateful for the journey so far and excited for what’s ahead! 🎉
Attending #ISMB2025 and honored to be recognized as a Fellow of the International Society for Computational Biology (@iscb Class of 2025)
🚨 We're hiring! Apply for the Sanger Excellence Fellowship to join our lab at the intersection of AI & biomedical science at @sangerinstitute Open to early-career researchers from Black heritage backgrounds. 🔗 Apply: sanger.wd103.myworkdayjobs.com/en-US/Wellcome…
Four more days to apply for postdoc and ML research scientist positions in my lab at @sangerinstitute at intersection of AIxBio
🚨 We’re hiring @sangerinstitute! Join us as a Postdoc or ML Scientist to build generative & foundation models for biology. 🧬 Spatial + single-cell omics 🧠 Diffusion, transformers, multimodal data 💊 Drug discovery via Open Targets Apply: Postdocs in computational biology…
We’re kicking off the first session of the #AIxBio conference at @sangerinstitute with Hani Goodarzi @genophoria, from Arc institute, discussing LLM applications in RNA biology.
I'm honoured to join @CRUK_CI and @Cambridge_Uni as a Junior Group Leader of AI for Cancer. My group will focus on reasoning, multimodality, hypothesis-making, and more to decode disease and health. A few positions are opened — consider applying to outsmart cancer together!
We are delighted to welcome @hana_aliee to the Institute. She joins as a Junior Group Leader and will lead her team in developing AI models to understand the molecular mechanisms driving health and disease. Find out more: cruk.cam.ac.uk/news/dr-hana-a…
I am a son of a former political prisoner in Iran and the nephew of an executed dissident and another political refugee in exile. My family has been subjected to more violence than anyone who is attacking Iran, at the hands of this regime. So it is with zero sympathy for this…
Defining “what is good” is central to both AI and Science. Despite massive efforts towards building the Virtual Cell, our recent @NatureBiotech article reflects on whether current gold standards (i.e., evaluation metrics) still hold up. nature.com/articles/s4158…
What makes a good cell embedding🧬? Is a higher score always better? Not quite! In this new preprint with @Jure & #Aviv, we ... [1/3] biorxiv.org/content/10.110…
![hcwww_'s tweet image. What makes a good cell embedding🧬? Is a higher score always better? Not quite! In this new preprint with @Jure & #Aviv, we ... [1/3]
biorxiv.org/content/10.110…](https://pbs.twimg.com/media/GKNsUWWaIAAlftO.png)
امیدوارم که خانواده هاتون سالم باشن، چشمهامون اشک آلوده برای ایران، برای کودکان و ادم های بیگناه که به خاک و خون کشیده شدن. برای همه دانشجویان ایرانی در زمینه هوش مصنوعی و بیوانفرماتیک و زیست شناسی محاسباتی که دچار مشکل شدن برای ادامه تحصیل یا تحقیقاتشون، به من ایمیل بزننین برای…
I'm excited to announce that I’ll be joining the Computer Science department at @JohnsHopkins as an Assistant Professor this Fall! I’ll be working on large language models, computational social science, and AI & society—and will be recruiting PhD students. Apply to work with me!
Excited to see our Cell2Sentence collaboration with @GoogleAI @GoogleDeepMind featured in Nature News! Check it out here: nature.com/articles/d4158… 🧬
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