Biocomputing group
@BiocomputingCMS
Computer simulations to study biological problems | State-of-the-art computational models: lipids + membrane proteins @UCalgary
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FYI: A post-doc position is available immediately in the Lyman group at the University of Delaware to work on membrane protein-lipid interactions. sites.google.com/udel.edu/phys-…
Listen to the scientists.
Roger Penrose – awarded this year’s #NobelPrize in Physics – was born in 1931 in Colchester, UK. He is a professor at @UniofOxford, UK. maths.ox.ac.uk/people/roger.p…
🙌 Congratulations to Professor Michael Houghton, from @UAlberta and @ComputeCanada user, for the Nobel Prize in Physiology or Medicine 2020 awarded jointly with Harvey J. Alter and Charles M. Rice for the discovery of Hepatitis C virus. #NobelPrize2020 #NobelPrize
"Trajectory New Generation: the trajectory format for the future of simulation" mdanalysis.org/2020/09/02/fin… describes @HugoMacdermott 's #GSOC 2020 work in progress on @GMX_TWEET 's powerful trajectory format. Python bindings in the standalone pyTNG package.
Tomorrow I have my PhD defense where I'll talk about lipid-protein interactions and present some of these results. I'll also share some updated interactive tools to visualize GPCR-lipid interactions. If interested, message me and I'll share the details to the zoom meeting.
Lipid-protein interactions are a unique property and defining feature of GPCRs buff.ly/2TYDzOt (@BiophysJ)
Who wants to help me be better? Have your say now!
Have you filled out our survey yet? We are improving #GROMACS and want to hear about your experience to ensure it is still relevant and useful to the community. Let us know your thoughts! Survey closes 14th June. @GMX_TWEET 📰 edinburgh.onlinesurveys.ac.uk/gromacs-user-s…
Lipid-protein interactions define a unique membrane environment for G protein-coupled receptors (GPCRs). Our latest publication by Besian I. Sejdiu @bisejdiu is out in @BiophysJ Check it out! bit.ly/300yKrV #OpenAccess
The amazing properties of ESCRT-III filaments: beautiful work from Joachim Moser, our lab, and the Bassereau group, Institut Curie.
Two papers on how ESCRT-III assembles on / governs membrane tube formation from @RouxLab and Patricia Bassereau's lab go.nature.com/3ccuQhZ go.nature.com/3d9zbDX
Finally got the time to try TS2CG by @CG_Martini I created a lipid membrane in the shape of my home country (Kosovo). Please note, however, that the whole system is unstable and quite a bit out of equilibrium. The same is true for the membrane model.😁 #Kosovo #Kosova #Pristina
REMINDER: Dear protein aficionados, don’t forget the webinar by Ken Dill on Monday in a week (June 1st). Abstracts of his talk and the following one by Lewis Kay can be found here proteinfoldinganddynamics.com
We are developing #GROMACS along with the user support to further align it with the research community. Fill out our user survey and let us know your feedback. @GMX_TWEET #compchem #compbio
As the organizers, we have decided to postpone our Integrative Modeling @EMBO Practical Course to 2-6 November 2020. Our registration will be open until the 31st of July and be reachable at meetings.embo.org/event/20-biomo… Wishing you all safe and healthy times @amjjbonvin @jpglmrodrigues
Enjoying debugging itp file design for new @CG_Martini lipids using latest version of @UnityMol 😃
A new postdoctoral position for the CHARMM-GUI development and research is posted: charmm-gui.org/?doc=jobs&view…
#HPC #supercomputing Supercomputer Fugaku @riken_en will be used to help fight against COVID-19 riken.jp/en/news_pubs/n…
riken.jp
Supercomputer Fugaku will be used to help fight against COVID-19
Supercomputer Fugaku will be used to help fight against COVID-19
700K+ people (many of them PC gamers like you!) have donated spare computing power to @foldingathome, creating the world's most powerful supercomputer. Learn how you can join in with your own PC to help model and defeat the COVID-19 "demogorgon" → pcmasterrace.org/folding/
Great progress capturing how the ferocious #COVID19 #Demogorgon (aka spike) opens its mouth to grab its human prey. Each step could present new therapeutic opportunities. Thanks to @foldingathome @Microsoft @Azure #AIforHealth @Mizimmer90!
Most SARS-CoV-2 protein systems are available now. We are currently working on spike glycoprotein models including all missing N-glycans and the transmembrane domain. Will let you know once they are available. charmm-gui.org/docs/archive/c…
We’re happy to announce our research CMS seminars are back next Monday! @NoskovLaborato1 members @GulruKayik will show results of virtual screening studies on PDE5 and #hERG and @sri_027 is in charge of the literature talk! See you on March 30 11h MST/MDT vía #Zoom Stay tuned!
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