DeepLabCut 🦄
@DeepLabCut
Python package for markerless pose estimation 4 animals (including humans) | free, open code | dev by @mwmathislab @amathislab
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🌎 Home Page: deeplabcut.org 📚Docs: deeplabcut.github.io/DeepLabCut/REA… 🛠️ Install: pip install 'deeplabcut[gui,tf]' 🐿 Model Zoo: modelzoo.deeplabcut.org ∞ Learn DeepLabCut - Free Online Course: view.genial.ly/5fb40a49f8a0ef… 👩🏾💻👨💻 DeepLabCut AI Residency: deeplabcutairesidency.org
This week, our PhD student @mrc_canela has led a on-site course on @DeepLabCut in the @HMar_research and @the_prbb where students from different institutions could learn why and how to use DLC for behavioral analysis. A good way to close before the summer break!
Last week we did the DeepLabCut Residency AI workshop at the Institute of Neurobiology @UNAMINB. Lots of participants ready to take their DLC skills to the next level. #DeepLabCutResidencyAI2025 #MexicoHub #DeepLabCut
Visited Tiohtià:ke for @DeepLabCut workshop hosted by AI Resident & marmoset researcher @Jiayue__Yang Played with SuperBird on many birds my husband & I saw while birding there eg Kéntsiakś/kentsiakária’as. Parks & islands there have deep Indigenous histories needing justice.
Today was the second day of the @DeepLabCut AI Residency at the Buenos Aires Hub in @Exactas_UBA! 🥰🥳🙌 Inspired by the impact of the ROV @geppaibiomar , we chose to track a crab captured by @SchmidtOcean in its natural environment 🦀🌊
The 2025 AI Residency Hub in Argentina is live!!! Apply now ⬇️
Este año llega la DLC AI Residency a CABA! 🎉 @DeepLabCut Durante dos días vamos a aprender y analizar datos de comportamiento 🐭🐒🦥 Anotate en 👇 forms.gle/YXoFNg7NUeYiT3… 📆 Aplicaciones abiertas hasta el 25/7 🚨 Cupos limitados ¡Te esperamos!
Happy Saturday! Have you checked out our latest docs, with lots of new additions to explain #DLC3 (which is backwards compatible, so no fear, update!). Here is a quick start guide ⬇️ Full link to install docs: deeplabcut.github.io/DeepLabCut/doc… SOTA model Guide🔥: deeplabcut.github.io/DeepLabCut/doc…
We are hiring for a top research software engineer to join our #DeepLabCut dev team! - do you want to contribute to a top CV package for life sciences? We are nearing 1M installations 🔥 - backend/frontend, git, python, torch exp. >2yrs req. Reach out: deeplabcut.org
✨ We are super thrilled to announce the #DeepLabCut AI Residents for 2025! They are hosting workshops around the 🌎 this winter/summer 🇲🇽🇦🇷🇨🇦🇪🇸: deeplabcutairesidency.org/our-team Meet Alejandro, Juliana, Sabrina, Jiayue & Marc! Many thanks to @KavliFoundation @cziscience for support!
‼️Aplicación para DeepLabCut AI Residency‼️ - Cupo limitado - Aplicación sin costo - Se reciben aplicaciones hasta el sábado 14 de junio - Notificación a los aplicantes aceptados el jueves 30 de junio. En los videos encontrarás ejemplos de diferentes casos para su aplicación.
🎊 Workshop alert! The Okinawa Institute of Science and Technology @OISTedu , Japan organizes on July 1 a hands-on DeepLabCut workshop led by @TrackingActions and @TrackingPlumes! Applications are open at oist.jp/conference/dee…
#DLCProTip: Did you know you can use unsupervised learning to adapt a trained model on the fly to your video in DeepLabCut!? When you run video analysis, check out “video adaptation” - it reduces jitter and provides better poses! ⬇️ nature.com/articles/s4146…
🚨A new demo notebook showing you how to use state of the art human pose and skeleton estimation models within #DeepLabCut3.0! 💃🏼🕺🏻 Bonus: Did you know that DeepLabCut 3.0 now has a NEW “low-level” API for advanced users? Check it out in this demo 🙌❤️ github.com/DeepLabCut/Dee…
OIST DeepLabCut Workshop参加募集のお知らせ（2025年4月21日より） jnss.org/academic-event…
Deeply proud that #DeepLabCut was used for behavioral analysis to support this landmark set of papers! In particular, the mice who became the connectome +functional dataset, were tracked with #DeepLabCut 🙌💜 🐭👀 nature.com/articles/s4158…
nature.com
Foundation model of neural activity predicts response to new stimulus types
Nature - A foundation model trained on neural activity of visual cortex from multiple mice accurately predicts responses to video stimuli and cell types, dendritic features and connectivity within...
How does the brain work? Scientists are closer to the answer with the largest wiring diagram and functional map of a mammalian brain to date. 🧵
Happy birthday #DeepLabCut! It was 7 years ago we first appeared on @arxiv 🙌🎊- thanks to the incredible users, contributors, & the software team who continue to make it the leading software for animal pose estimation! 🙏🏼💜 arxiv.org/abs/1804.03142 DeepLabCut.org
🎉 Might seem like a funny milestone, but super proud to have 2K issues closed! Thanks to all the users and the #DLCTeam for continuing to push DLC to be the best it can 💜 Onwards! 🚀 github.com/DeepLabCut/Dee…
Next we used BlueBerry deep-brain implants to target the VTA in freely interacting mice to reinforce chasing in different pairs under closed-loop control (@DeepLabCut Live). This altered group dynamics opposing natural hierarchies, resulting in a train led by the dominant mouse.
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Mackenzie Weygandt Mathis, PhD
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