
Microreact
@MyMicroreact
Open data linkage, visualization and sharing for genomic epidemiology and phylogeography @thecgps @bdi_oxford Funded by Wellcome & Li Ka Shing foundation.
おすすめツイート
Thanks for reporting - Normal service resumed - might have been too much turkey - thanks for bearing with us :-)
great to see @myMicroreact being utilised to interpret epi-linked sequence data @NorwichResearch, @NNUH, @NHSuk, @CovidGenomicsUK, and @PHE_uk
Since COVID-19 hit the UK in March, we've been at the forefront of genomic sequencing – sequencing over 18,000 samples. Our new photo essay explores the collective effort of the Quadram, @NorwichResearch, @NNUH, @NHSuk, @CovidGenomicsUK, and @PHE_uk: ow.ly/vVBx50E95GE
RoomRater Microreact edition: cheery flowers, newly minted genomic epi', but cat has been staring at @mymicroreact trees for too long - 10/10 @KCMellor
Celebrating #InternationalWomenInScienceDay #WFH with fine feline company. Proud to have finished my genomic epi PhD during lockdown and to be working with the awesome @pneumowatch team #WellcomeGenomeWomen @sangerinstitute

Genomics of SARS-CoV-2 in The Philippines - Great to see Microreact use for delivering insight as part of @geco_phl @inezmedado @RITMPH

We've also made a @MyMicroreact project to take a look at what we know about #SARSCoV2 in the #Philippines so far (using all the shared GISAID and NCBI genomes). Take a look! microreact.org/project/4hz5Hy…
Great to see Microreact making an appearance in this important announcement @TheCGPS @bdi_oxford
We’re pleased to announce a donation of £100 million from @INEOS to establish the new INEOS Oxford Institute, helping us to combat one of the world’s greatest healthcare challenges - antimicrobial resistance >> ox.ac.uk/news/2021-01-1…
we are chuffed to see @jacindaarden lecturing @ESRNewZealand on SARS-CoV-2 lineages with Microreact ;-)
Prime Minister @jacindaardern made a surprise visit to ESR today to say thanks for the hard work and long hours our staff have put in during the COVID-19 pandemic. She was fascinated by how we are helping to understand the latest outbreak through genome sequencing

Excited to share 1st preprint from our lab! Genomic analysis of clinical Campylobacter strains from Chile led by Veronica Bravo tinyurl.com/y7wr4fsf Great collaboration with @narjol1 and Lorena Porte, Thomas Weitzel @Clinicaalemana! @MyMicroreact link microreact.org/project/VbEQsZ…
Genomic analysis of the diversity, antimicrobial resistance and virulence potential of Campylobacter jejuni and Campylobacter coli strains from a private health care center in Central Chile biorxiv.org/cgi/content/sh… #bioRxiv
UPDATE: 22,218 SARS-CoV-2 @CovidGenomicsUK seen here within the global tree (n=33,904). Much improved tree viewer in @MyMicroreact along with global (pangolin) lineage distribution. Mammoth effort from across the UK sequencing and analysis centres microreact.org/project/cogcon…
SeqCOVID Spain @MyMicroreact podemos ver la distribución de muestras y linajes en el tiempo y el espacio de los genomas generados en el consorcio. microreact.org/project/SiIqqY… seqcovid.csic.es/microreact/ Brought to You by Your Friendly Neighborhood @GaloGoig with help from @leosanbu

Good show on the Microreact pies @Justin_OGrady :-) !
Scotland has a slightly different virus! Dr Justin O’Grady at the Quadram Institute (they are 1 of 16 uk labs sequencing #coronavirus genomes from 1000s of sick patients...)...the UK is WORLD-LEADING in this research....@TheQuadram
Incredible collective effort from 16 sequencing centres across the UK to aid our ongoing understanding of COVID-19 View the Microreact here : microreact.org/project/cogcon… @CovidGenomicsUK
🧬 The total number of #COVID19 sequences now released is 16,380. The sequences and analysis are freely available to view 👉 cogconsortium.uk/data

Our trees are on @MyMicroreact for you to play with: microreact.org/project/CampyP… microreact.org/project/CampyP…
10k #SARS_COV_2 genomes- incredible work by an incredible, well supported scientific collaboration cogconsortium.uk/about/, and rapid data sharing of course. Analysis of the UK strains: microreact.org/project/COGcon… @MyMicroreact
🧬 The total number of #COVID19 sequences now released is 16,380. The sequences and analysis are freely available to view 👉 cogconsortium.uk/data

And if you are interested in exploring the current analysis of worldwide lineages circulating in the UK, here is some analysis of ~9000 UK genomes divided into lineages via @TheCGPS fantastic @MyMicroreact website: microreact.org/project/COGcon…
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Centre for Genomic Pathogen Surveillance
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