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Bokai Zhu

@ZhuBokai

Check out our recent tool using deep learning to better discover immune cells in tissues! Always a pleasure to work with this great team: @ZongmingMa, @SizunJ, @GarryPNolan, @ironmathmo (Sheng Gao), @ShuxiaoC, @shaleklab and the rest who may or may not be on this platform!

1⃣Small panels in #CODEX, #Xenium & #CosMx make fine cell typing tough. Our collab with @ZhuBokai , @SizunJ & @GarryPNolan brings #CellLENS! Published today in Nature Immunology: nature.com/articles/s4159….



Always a pleasure working with such a talented team—thrilled to see our work published in Nature Genetics today! For people interested in understanding their tissue's state deeper, try our new tool MESA!

Excited to share our new study out in Nature Genetics @NatureGenet! We introduce MESA, a spatial omics framework that draws inspiration from ecology and integrates multiomics data to study the spatial architecture of tissues in health and disease. Building on the analogy between…

DaisyYDing's tweet image. Excited to share our new study out in Nature Genetics @NatureGenet! We introduce MESA, a spatial omics framework that draws inspiration from ecology and integrates multiomics data to study the spatial architecture of tissues in health and disease.

Building on the analogy between…


Bokai Zhu reposted

Excited to share our new study out in Nature Genetics @NatureGenet! We introduce MESA, a spatial omics framework that draws inspiration from ecology and integrates multiomics data to study the spatial architecture of tissues in health and disease. Building on the analogy between…

DaisyYDing's tweet image. Excited to share our new study out in Nature Genetics @NatureGenet! We introduce MESA, a spatial omics framework that draws inspiration from ecology and integrates multiomics data to study the spatial architecture of tissues in health and disease.

Building on the analogy between…

Finally online in Nature Communications @NatureComms today: nature.com/articles/s4146…. Huge thanks to everyone involved in the study! @SizunJ @GarryPNolan @xavi_r_c @MikeAngeloLab @shaleklab @yeoyaoyu and others that are not on this platform lol

Wanna dissect host-microbiome interactions in situ? Incredibly excited to share work from @BokaiZhu with @GarryPNolan, and @shaleklab @MikeAngeloLab @yeoyaoyu @xavi_r_c @hanimal725 and others

SizunJ's tweet image. Wanna dissect host-microbiome interactions in situ? Incredibly excited to share work from @BokaiZhu with @GarryPNolan, and @shaleklab @MikeAngeloLab @yeoyaoyu @xavi_r_c @hanimal725 and others


Bokai Zhu reposted

Whats the physiological role of tumor viruses? How do we systematically study the tissue microenvironment in a spatially iterative fashion? Well here's a fun paper! By @yeoyaoyu Huaying @ZhuBokai Yunhao, w/ Margaret Shipp, Scott Rodig & more biorxiv.org/content/10.110…

SizunJ's tweet image. Whats the physiological role of tumor viruses? How do we systematically study the tissue microenvironment in a spatially iterative fashion? 

Well here's a fun paper! By @yeoyaoyu Huaying @ZhuBokai Yunhao, w/ Margaret Shipp, Scott Rodig & more
biorxiv.org/content/10.110…

Bokai Zhu reposted

Wanna dissect host-microbiome interactions in situ? Incredibly excited to share work from @BokaiZhu with @GarryPNolan, and @shaleklab @MikeAngeloLab @yeoyaoyu @xavi_r_c @hanimal725 and others

SizunJ's tweet image. Wanna dissect host-microbiome interactions in situ? Incredibly excited to share work from @BokaiZhu with @GarryPNolan, and @shaleklab @MikeAngeloLab @yeoyaoyu @xavi_r_c @hanimal725 and others

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