BioThings API
@biothingsapi
Making High Performance Data APIs in Biology. Provide an SDK to build APIs like @mygeneinfo @myvariantinfo
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Now you can easily find sets of genes involved in #GeneOntology processes, diseases and more with our new @mygenesetinfo API. Try it out at mygeneset.info
mygeneset.info
My Geneset
A website and API to collect, save, and share genes
Soft launch of our brand-new MyGeneset.info, a web toolset for sharing functional gene sets in all species with programmatic #API access. A joint work of @vincerubinetti @ravila_4 & the @biothingsapi team of @GreeneScientist & @chunleiwu labs!
mygeneset.info
My Geneset
A website and API to collect, save, and share genes
Our new SDK release comes with support for both #elasticsearch 7 and 8. Learn more here: pypi.org/project/biothi…
New BioThings SDK #pypi package released with support for #python 3.9, 3.10 and a lot of other improvements! pypi.org/project/biothi…
The @myvariantinfo talk will be the last talk of the Wednesday #BOSC2022 session on #DataAccess and #visualization
Interested in the latest developments with MyVariant.info? Our very own @YaoY87 will be giving a talk at #BOSC2022 / #ISMB2022 on Wednesday (Session 3a) open-bio.org/events/bosc-20…
We would like to thank the teams at @gisaid @cvisb @scrippsresearch @biothingsapi for making this possible, our funders @niaidnews @cdcgov @data2health, & the thousands of organizations & individuals around the world who share data to fight the pandemic.
New #preprint on the @biothingsapi SDK to build your own RESTful APIs from the @chunleiwu and @andrewsu labs at @scrippsresearch. biorxiv.org/content/10.110…
You can install the #python package using "pip install biothings" pypi.org/project/biothi…
APIs like ours play a big role in #FAIRdata and #OpenData. The BioThings SDK makes building such APIs easier. More about it in the new #preprint from the @biothingsapi team: biorxiv.org/content/10.110…
The BioThings SDK has been used to build APIs like the ones used by @DiseaseOutbreak. Learn more about it from the new #preprint biorxiv.org/content/10.110…
Want to build your own biomedical data API like @mygeneinfo? Read about the BioThings SDK in our new #preprint on #biorxiv_bioinfo. #FAIRdata biorxiv.org/content/10.110…
The Data Discovery Engine and Schema Playground are natural extensions of the BioThings #bioinformatics tools ecosystem. Learn more about them from our new #preprint doi.org/10.1101/2021.0…
Hi @chunleiwu! I used MyGene.info API today. It's a super helpful tool, thanks for making it and for writing good instructions. I used it to grab Entrez # for a few hundred gene symbols. Went from "what's this tool?" to results in about 10 minutes. #Bioinformatics
🚀@stromulus that's awesome to hear! In case it's useful, our @biothings team made available other APIs like @myvariantinfo @mycheminfo @mydiseaseinfo too, in addition to @mygeneinfo :-)
NEW #variant surveillance tool from @cvisb @scrippsresearch: Search by location to find #SARSCoV2 lineage & mutation prevalence in any country, state, or region at outbreak.info/location-repor… #COVID19 #opendata
A new #SARS_CoV_2 mutation situation report feature is now available on outbreak.info. The tool is a collaborative effort by members of the labs of @K_G_Andersen @andrewsu & @chunleiwu at @scrippsresearch scripps.edu/news-and-event…
All #COVID19 and #SARSCoV2 data is available via #opensource API, built using @biothingsapi Try it: api.outbreak.info
OncoPDSS: an evidence-based clinical decision support system for #oncology pharmacotherapy at the individual level pubmed.ncbi.nlm.nih.gov/32770988/
iGMDR: Integrated #Pharmacogenetic Resource Guide to Cancer Therapy and Research pubmed.ncbi.nlm.nih.gov/32916316/
See @mygeneinfo Overview: elastic.co/blog/uncoiling… Slides: slideshare.net/mobile/anewgen…
The API was built using our #BioThings #SDK
Looking for #Clinicaltrials , research papers, #datasets, and more on #COVID19? Try our new tool (we also have APIs). #opendata #metadata outbreak.info/blog/outbreak-…
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