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Bramadi Arya

@bramadiarya

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“The next big game-changing revolution is in biology.” Cannot agree more! We are at a pivotal moment where vast amounts of biological data are being generated, and large-scale models are increasingly accessible for analyzing omics and sequences. There’s truly no better time…


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The choice of whether to use Seurat or Scanpy for single-cell RNA-seq analysis typically comes down to a preference of R vs. Python. But do they produce the same results? In biorxiv.org/content/10.110… w/ @Josephmrich et al. we take a close look. The results are 👀 1/🧵

lpachter's tweet image. The choice of whether to use Seurat or Scanpy for single-cell RNA-seq analysis typically comes down to a preference of R vs. Python. But do they produce the same results? In biorxiv.org/content/10.110… w/ @Josephmrich et al. we take a close look. The results are 👀 1/🧵

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Benchmarks provide us with valuable insights about our tools. Reach out to us to discuss metrics or conclusions: discourse.scverse.org. Early feedback allows us to improve our methods and provides benefits to the computational biology community.


This joke is aimed at a very small demographic, maybe not everyone will get it, lol

heard UMAP was popular on twitter, anyone have any advice on how to tighten up the clusters?

willovvens's tweet image. heard UMAP was popular on twitter, anyone have any advice on how to tighten up the clusters?


Happy Eid al-Adha 2023

اَللهُ أًكْبَرُ اَللهُ أَكْبَرُ، لاَ إِلَهَ إِلاَّ اللهُ وَاللهُ أَكْبَرُ، اَللهُ أَكْبَرُ وَلِلَّهِ اْلحَمْدُ Selamat Iduladha 1444 H Semoga sebagai Muslim kita selalu mendapatkan keberkahaan & selalu menjadi orang murah hati serta saling berbagi. #Muhammadiyah #IDULADHA2023

muhammadiyah's tweet image. اَللهُ أًكْبَرُ اَللهُ أَكْبَرُ، لاَ إِلَهَ إِلاَّ اللهُ وَاللهُ أَكْبَرُ، اَللهُ أَكْبَرُ وَلِلَّهِ اْلحَمْدُ

Selamat Iduladha 1444 H
Semoga sebagai Muslim kita selalu mendapatkan keberkahaan & selalu menjadi orang murah hati serta saling  berbagi. 
#Muhammadiyah #IDULADHA2023


Let us greet the New Year with happiness and optimism.

#Songkran is all about Thai traditions. Songkran, listed s UNESCO's tentative intangible cultural heritage, is an occasion to straighten yourselves inside and out. Here at the TAT, we are wishing you the best of everything this Songkran. Happy Thai New Year to everyone!



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I need to raise awareness about an important point in #scRNAseq data analysis, which, in my opinion, is not acknowledged enough: ‼️In practice, most cell type assignment methods will fail on totally novel cell types. Biological/expert curation is necessary! Here's one example👇

simocristea's tweet image. I need to raise awareness about an important point in #scRNAseq data analysis, which, in my opinion, is not acknowledged enough:

‼️In practice, most cell type assignment methods will fail on totally novel cell types. Biological/expert curation is necessary!

Here's one example👇

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This is an important tip⚠️ When interpreting #Bioinformatics results,don't cherry-pick your gene/pathway results! Don't only discuss/analyze the specific hits that support your hypothesis Let the data speak for what it is. Here's hands-on advice on how to NOT overinterpret🧵

simocristea's tweet image. This is an important tip⚠️

When interpreting #Bioinformatics results,don't cherry-pick your gene/pathway results! 

Don't only discuss/analyze the specific hits that support your hypothesis

Let the data speak for what it is.

Here's hands-on advice on how to NOT overinterpret🧵

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Only one week until the HCA Asia Meeting in Bangkok, Thailand, November 3-4th, 2022. You can still register for online attendance at events.humancellatlas.org/hca-asia2022 #HCA2022Asia


Without commitment, you will never begin, but without consistency, you will never complete.The process is not easy. So, keep working, keep striving, never give up, fall down seven times, get up eight. -Adapted from a speech by Denzel Washington-


"If you cannot—in the long run—tell everyone what you have been doing, your doing has been worthless." Erwin Schrödinger Austrian Physicist (1887-1961)


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the next frontiers in #biotech. our views on the next big unmet medical needs to pursue. 🧵 👇 (5)


It's finally arrived. Many thanks, @Pfizer Indonesia, @tenggaraid for the souvenirs & the fantastic opportunity to participate, facilitate discussions, & get guidance from experts & exposure from the professional research community from home & abroad #PfizerBiotechFellowship

bramadiarya's tweet image. It's finally arrived. Many thanks, @Pfizer Indonesia, @tenggaraid for the souvenirs & the fantastic opportunity to participate, facilitate discussions, & get guidance from experts & exposure from the professional research community from home & abroad
#PfizerBiotechFellowship

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Got a strong #immunesystem? You might want to thank the friendly bacteria living in your gut. Among many jobs, some even make their own version of #vitaminA. @AlenghatLab #microbiota #guthealth Study @cellhostmicrobe bit.ly/3C5QWAp Learn more: scienceblog.cincinnatichildrens.org/vitamin-a-help…

CincyChildrens's tweet image. Got a strong #immunesystem? You might want to thank the  friendly bacteria living in your gut. Among many jobs, some even make their own version of #vitaminA. @AlenghatLab #microbiota #guthealth Study @cellhostmicrobe bit.ly/3C5QWAp Learn more: scienceblog.cincinnatichildrens.org/vitamin-a-help…

Hari terakhir submit konsep proposal bagi yg ingin ikut program BIFA.

Reminder: Today is the LAST day to submit your concept note for the third call under the Biodiversity Information Fund for Asia (#BIFA) programme. €105,000 total funding available, up to €15,000 per project bit.ly/2oUjps5

GBIF's tweet image. Reminder: Today is the LAST day to submit your concept note for the third call under the Biodiversity Information Fund for Asia (#BIFA) programme. €105,000 total funding available, up to €15,000 per project bit.ly/2oUjps5


Data mining dan aplikasinya dlm biological data #workshop #bioinformatika

bramadiarya's tweet image. Data mining dan aplikasinya dlm biological data #workshop #bioinformatika

My first run after a long break #fridaymorningrun

bramadiarya's tweet image. My first run after a long break #fridaymorningrun

Keep calm and take your lunch break.

Don't forget to eat your lunch with your partner. Stay strong! :)

duniastartupcom's tweet image. Don't forget to eat your lunch with your partner. Stay strong! :)


United States Xu hướng

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