DANIO-CODE
@daniocode
This is the official Twitter account of DANIO-CODE, an international collaborative effort that aims to annotate the functional elements of the zebrafish genome.
You might like
The comprehensive atlas of developmental regulatory elements in zebrafish is published today in @NatureGenet nature.com/articles/s4158…. In addition to the BioRxiv submission in this paper we added further resources and results. (1/n)
DANIO-CODE is proud to share our findings and a huge multi-genomics resource on the regulatory elements in the development of #zebrafish. We analyzed 1,802 previously (un)published sequencing data sets across 38 developing stages and 21 assay types. (1/n) biorxiv.org/content/10.110…
Fantastic talk at @BCGB_UoB by @bogdanoviclab from @CABD_UPO_CSIC on DNA methylation during vertebrate development and evolution @daniocode #epigenetics #embryogenesis #daniocode
One week ago we released zebrahub.org the @czbiohub #scRNAseq dataset of zebrafish development with a very intuitive explorer. The data is open access here doi.org/10.6084/m9.fig… In this #Thread I'm going to give you a tutorial on how to use #zebrahub 👇 1/n
📡 Big day today! Our first #singlecell RNAseq dataset is now live on #Zebrahub: 10 #zebrafish developmental stages, 40 individual embryos, ~120'000 cells. Dataset spans end-of-gastrulation to 10-day larvae. Portal: zebrahub.ds.czbiohub.org Dataset: doi.org/10.6084/m9.fig… 1/n
The deep learning model integrated information about enhancer activity (like ChIP-seq data, histone modification data, known motif sequences and actual vertebrate data from zebrafish @daniocode. We found patterns of transcription factor binding site enrichment 8/n
I’m proud to share my postdoctoral research in @SMBurgessLab identifying regeneration enhancers in zebrafish inner ears at single-cell resolution. 1/n
A regulatory network of Sox and Six transcription factors initiate a cell fate transformation during hearing regeneration in adult zebrafish dlvr.it/SX2xBS
cell.com
A regulatory network of Sox and Six transcription factors initiate a cell fate transformation...
Jimenez et al. interrogate the epigenomic and transcriptomic landscape of regenerating adult zebrafish inner-ear sensory epithelia. They show that the support-cell population transitions to an...
Congrats to @ferencemueller and the @daniocode team on their @NatureGenet paper! nature.com/articles/s4158…. Incredibly valuable resource. Underscores collaborative spirit in #zebrafish community. Maybe @NIH and @ERC_Research can step up for phase 2 support?
Good to see this published and glad we could provide support.
The comprehensive atlas of developmental regulatory elements in zebrafish is published today in @NatureGenet nature.com/articles/s4158…. In addition to the BioRxiv submission in this paper we added further resources and results. (1/n)
![uwe_ohler's profile picture. computational biologist & occasional singer. [classical] music nerd. @BIMSB_MDC @MDC_Berlin](https://pbs.twimg.com/profile_images/783035530657300481/hsZZfQOw.jpg)
United States Trends
- 1. #BaddiesUSA 39.8K posts
- 2. Rams 25.4K posts
- 3. Cowboys 93.4K posts
- 4. Eagles 133K posts
- 5. #TROLLBOY 1,506 posts
- 6. Stafford 11.6K posts
- 7. Bucs 11.2K posts
- 8. Baker 19.4K posts
- 9. Scotty 7,958 posts
- 10. Chip Kelly 6,135 posts
- 11. Raiders 61.5K posts
- 12. #RHOP 9,151 posts
- 13. Teddy Bridgewater 1,057 posts
- 14. Stacey 29.1K posts
- 15. Todd Bowles 1,577 posts
- 16. #ITWelcomeToDerry 10.7K posts
- 17. Pickens 30.1K posts
- 18. Ahna 4,802 posts
- 19. Browns 107K posts
- 20. Shedeur 122K posts
You might like
Something went wrong.
Something went wrong.