#deepvariant search results

Overcoming limitations to customize DeepVariant for domesticated animals with TrioTrain. #GeneticVariants #DeepVariant #NonHumanSpecies #Bioinformatics @genomeresearch bsky.app/profile/nanopo…

LIVE at #BG24: Jenna Kalleberg from @MIZCOMO explains to #DeepVariant-TrioTrain: a customized #multi-#species approach to improve #variant calling in #animal #genomes

Inspecting the embeddings of @Google DeepVariant's internal layers reveals that structural variants and mobile repetitive elements are important for variant calling! I take this as #Deepvariant recommending the use of long reads for genomic variant calling.

Open Omics is open-sourced, community-driven, full-stack solution designed to speed up and lower the cost of #omics pipelines. The latest version consists of pipelines for genomics, protein folding and single cell RNASeq. #Deepvariant #Alphafold #scRNASeq #BWAMEM

Eager to learn more about #DeepVariant and its impact on genomic sequencing? Check out this comprehensive article for all the insights: bioinformaticschool.com/?p=384 📚🔍 #DeepDive #ReadAndDiscover

Precision of #DeepVariant is paving a new path in personalized medicine. Imagine treatments tailored to your genetic makeup! This is where technology meets healthcare. 💊📊 #HealthcareInnovation #PersonalizedMedicine

Did you know #DeepVariant uses RGB images for AI analysis of genomic data? This unique approach blends visual creativity with scientific data analysis. A true intersection of art and science! 🎨🔬 #DataVisualization

Dive into the tech behind #DeepVariant: Haplotype-aware realignment, variant identification, and more. It's where cutting-edge technology meets genomics! 🌐🔍 #InnovativeTech #DeepLearningInScience

Comparison alert! #DeepVariant outperforms traditional methods like GATK in genetic variant calling. It's not just an upgrade; it's a leap forward in bioinformatics! 📊🧬 #NextGenSequencing #DataAccuracy

The power of deep learning in #DeepVariant is revolutionizing how we process genomic sequencing data. It's not just about accuracy; it's about advancing our understanding of genetics with AI's help! 🤖🧪 #ScienceEvolution #GeneticResearch

🌟 Excited about #DeepVariant? Google's AI is transforming genomic sequencing with unparalleled precision. This tool is a game-changer in identifying genetic variants, making complex data easier to understand. 🧬🔬 #Genomics #TechInnovation🌟

Wicked Fast: #NVIDIA's latest version of Parabricks introduces accelerated #DeepVariant on its GPUs, along with a new retraining tool. Read the @GenomeWeb article: hubs.li/Q01XGPpJ0 #genomics #ai

A new #DeepVariant retraining tool is now available on @TerraBioApp with the latest NVIDIA #Parabricks 4.1 release. Everyone has the ability to fine tune DeepVariant on their own data and improve variant calling. #AI #genomics #research nvda.ws/3WfBfkZ

@GenomicsUK delivering a great @PacBio update including @khmiga #deepvariant data available at github.com/google/deepvar…

Might be true for your lab but in general it doesn't sound right, most probably misdirected? Most of them are thrown into the rat race of publish or perish. In #AI e.g. its probably much better to be with comp like @GoogleAI #deepvariant @DeepMind #alphafold & fold a variant 🤓

Excited to share about #DeepVariant, a genomic variant caller using deep neural networks for accurate results in precision medicine. Pushing boundaries in #Genomics with #DeepLearning. #PrecisionMedicine Try now with superbio.ai: app.superbio.ai/apps/104?id=62…

#GATK, #DRAGEN and #DeepVariant are all almost en par - Good news for streamlined diagnostics. nature.com/articles/s4159…

By using @googleai’s #DeepVariant we reduced Mendelian inheritance errors by half vs GATK. We then used these SNPs to calculate inbreeding levels for the entire sequenced pedigree. This also creates a high-quality SNP set and trained DV model for future research as well! 2/n

👉 For instance, Google’s deep learning-based variant caller is named #DeepVariant, which interprets data from high-throughput sequences into a clear picture of the genome only in one day.

Watch these talks about Q40+ on AVITI & Cost Effective Trio Seq by Semyon Kruglyak, PhD, our VP of Informatics: bit.ly/3byQ2nD Thank you to our partners on this work: @GoogleHealth #DeepVariant, @GenooxTeam, & @UCSanDiego @ShileyEye w/ Radha Ayyagari, PhD #NGS #biotech

. @GoogleAI’s paper on #DeepLearning for variant calling is out @NatureBiotech⁩ buff.ly/2Ogxlry GitHub: buff.ly/2QXmzoU #DeepVariant #NeuralNetwork #Genetics #Bioinformatics

Study by @dnanexus seems to put @googleresearch #DeepVariant way above alternatives like #GATK #FreeBayes #Samtools New default genomics variant calling standard? HT @DShaywitz

How to improve the accuracy of #DeepVariant even further? Tackle phasing. See how the @GoogleHealth team improved their popular variant caller to make the most of #HiFiReads with a new haplotype channel: ow.ly/ORqt50DuNG0

Curious about #DeepVariant and whether deep learning works in genomics? My fellow scientists at @DNAnexus have insights to share: blog.dnanexus.com/2017-12-05-eva…

Happy to see the latest #DeepVariant preprint shows Strelka2 with the highest germline SNV and indel accuracy among conventional methods. Also great to see OSS release and continuing indel progress from the DV team, looking forward to seeing how much farther this will go.

#deepvariant #pacbio

#DeepVariant is one of the #ML tools used in #genomics #Bioinformatics created by @Google github.com/google/deepvar…

#DeepVariant’s unique adaptability allowed @GoogleAI & DNAnexus researchers to create a highly accurate SNP & Indel Calling on @PacBio CCS model. ow.ly/ZPQQ30nldK7

So shiny and new!! Really excited to get this into the workstation and start putting it through its paces. First up will be some variant calling using #Deepvariant. #Nvidia #bioinformatics

#DeepLearning in #Genomics: #DeepVariant on DNAnexus Pilot Program. Request Access Today! ow.ly/vNYY30h3xdi

@GenomicsUK delivering a great @PacBio update including @khmiga #deepvariant data available at github.com/google/deepvar…

Watch these talks about Q40+ on AVITI & Cost Effective Trio Seq by Semyon Kruglyak, PhD, our VP of Informatics: bit.ly/3byQ2nD Thank you to our partners on this work: @GoogleHealth #DeepVariant, @GenooxTeam, & @UCSanDiego @ShileyEye w/ Radha Ayyagari, PhD #NGS #biotech

@googleresearch open-sourced #DeepVariant: goo.gl/YUjChy

LIVE at #BG24: Jenna Kalleberg from @MIZCOMO explains to #DeepVariant-TrioTrain: a customized #multi-#species approach to improve #variant calling in #animal #genomes

Thanks for the numbers! So #DeepVariant still goes up from 10x to 25x #PacBio #HiFi

What happens when @GoogleAI retools the SNP and Indel caller #DeepVariant for #Sequel2 #HiFi reads? Accuriacies comparable to short-read methods, w/ the benefit of expanding into difficult regions of the genome. Hear all about it July 17 from @acarroll_ATG ow.ly/kkQm50uXqUj

Will #DeepVariant be trained to handle #RNAseq or #IsoSeq data too? @acarroll_ATG says yes, as soon as datasets available. Keep up-to-date on releases at github.com/google/deepvar…. And our blog, which will post a full recap & video. (And thank these folks for the resource!)

Take a deep dive into #deepvariant; read DNAnexus #AI expert @infoecho’s in-depth analysis of #deeplearning methods & insights ow.ly/2LGp30nL6XL

#ASHG18 Tomasz Stokowy poster 1054. Comparison of variant callers in clinical setting. #DeepVariant with highest SNP and Indel accuracy at 30x or 15x. #DeepVariant at 15x coverage is more accurate than GATK at 30x. Can achieve very high accuracy and save reagent. Check it out!

Overcoming limitations to customize DeepVariant for domesticated animals with TrioTrain. #GeneticVariants #DeepVariant #NonHumanSpecies #Bioinformatics @genomeresearch bsky.app/profile/nanopo…