Bioinformaticx's profile picture. Bioinformatics methods & tools #genomics #proteomics #metagenomics #assembly #virology #plant #biology #sequencing #DNA #eDNA #aDNA #genes #ML #AI #science #DB

Bioinformaticx

@Bioinformaticx

Bioinformatics methods & tools #genomics #proteomics #metagenomics #assembly #virology #plant #biology #sequencing #DNA #eDNA #aDNA #genes #ML #AI #science #DB

Ghim

Learning a generalized graph transformer for protein function prediction in dissimilar sequences doi.org/10.1093/gigasc… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. Learning a generalized graph transformer for protein function prediction in dissimilar sequences

doi.org/10.1093/gigasc…

#Bioinformatics
#Bioinformaticx

Intra-host genomic diversity and integration landscape of human tissue-resident DNA virome doi.org/10.1093/nar/gk… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. Intra-host genomic diversity and integration landscape of human tissue-resident DNA virome

doi.org/10.1093/nar/gk…

#Bioinformatics 
#Bioinformaticx

A super-pangenome of the North American wild grape species doi.org/10.1186/s13059… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. A super-pangenome of the North American wild grape species

doi.org/10.1186/s13059…

#Bioinformatics 
#Bioinformaticx

AlcoR: alignment-free simulation, mapping, and visualization of low-complexity regions in biological data doi.org/10.1093/gigasc… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. AlcoR: alignment-free simulation, mapping, and visualization of low-complexity regions in biological data

doi.org/10.1093/gigasc…

#Bioinformatics 
#Bioinformaticx

Efficient and accurate KIR and HLA genotyping with massively parallel sequencing data doi.org/10.1101/gr.277… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. Efficient and accurate KIR and HLA genotyping with massively parallel sequencing data

doi.org/10.1101/gr.277…

#Bioinformatics
#Bioinformaticx

Efficient mapping of accurate long reads in minimizer space with mapquik doi.org/10.1101/gr.277… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. Efficient mapping of accurate long reads in minimizer space with mapquik

doi.org/10.1101/gr.277… 

#Bioinformatics 
#Bioinformaticx

Efficient short read mapping to a pangenome that is represented by a graph of ED strings doi.org/10.1093/bioinf… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. Efficient short read mapping to a pangenome that
is represented by a graph of ED strings

doi.org/10.1093/bioinf…

#Bioinformatics 
#Bioinformaticx

Scrooge: A Fast and Memory-Frugal Genomic Sequence Aligner for CPUs, GPUs, and ASICs doi.org/10.1093/bioinf… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. Scrooge: A Fast and Memory-Frugal Genomic Sequence Aligner for CPUs, GPUs, and ASICs

doi.org/10.1093/bioinf…

#Bioinformatics
#Bioinformaticx

mlf-core: a framework for deterministic machine learning doi.org/10.1093/bioinf… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. mlf-core: a framework for deterministic machine learning

doi.org/10.1093/bioinf…

#Bioinformatics
#Bioinformaticx

DNAscan2: a versatile, scalable, and user-friendly analysis pipeline for human next-generation sequencing data doi.org/10.1093/bioinf… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. DNAscan2: a versatile, scalable, and user-friendly analysis pipeline for human next-generation sequencing data

doi.org/10.1093/bioinf…

#Bioinformatics
#Bioinformaticx

DeepOM: Single-molecule optical genome mapping via deep learning doi.org/10.1093/bioinf… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. DeepOM: Single-molecule optical genome mapping via deep learning

doi.org/10.1093/bioinf…

#Bioinformatics 
#Bioinformaticx

Unmasking the tissue-resident eukaryotic DNA virome in humans doi.org/10.1093/nar/gk… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. Unmasking the tissue-resident eukaryotic DNA virome in humans

doi.org/10.1093/nar/gk…

#Bioinformatics 
#Bioinformaticx

Foldcomp: a library and format for compressing and indexing large protein structure sets doi.org/10.1093/bioinf… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. Foldcomp: a library and format for compressing and indexing large protein structure sets

doi.org/10.1093/bioinf…

#Bioinformatics 
#Bioinformaticx

Unmasking the tissue-resident eukaryotic DNA virome in humans doi.org/10.1093/nar/gk… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. Unmasking the tissue-resident eukaryotic DNA virome in humans

doi.org/10.1093/nar/gk…

#Bioinformatics 
#Bioinformaticx

AGC: Compact representation of assembled genomes with fast queries and updates doi.org/10.1093/bioinf… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. AGC: Compact representation of assembled genomes with fast queries and updates 

doi.org/10.1093/bioinf…

#Bioinformatics 
#Bioinformaticx

Chromosome-level genome assembly for the Aldabra giant tortoise enables insights into the genetic health of a threatened population doi.org/10.1093/gigasc… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. Chromosome-level genome assembly for the Aldabra giant tortoise enables insights into the genetic health of a threatened population

doi.org/10.1093/gigasc…

#Bioinformatics
#Bioinformaticx

Needle: a fast and space-efficient prefilter for estimating the quantification of very large collections of expression experiments doi.org/10.1093/bioinf… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. Needle: a fast and space-efficient prefilter for estimating the quantification of very large collections of expression experiments

doi.org/10.1093/bioinf…

#Bioinformatics
#Bioinformaticx

Insertions and deletions as phylogenetic signal in an alignment-free context doi.org/10.1371/journa… #Bioinformatics #Bioinformaticx

Bioinformaticx's tweet image. Insertions and deletions as phylogenetic signal in an alignment-free context

doi.org/10.1371/journa…

#Bioinformatics
#Bioinformaticx

Loading...

Something went wrong.


Something went wrong.