Gramene Database
@GrameneDatabase
A resource for comparative plant genomics using plant genomes, gene annotations, genetic variation, expression & pathways. RTs/Follows don't imply endorsements.
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Exciting news! The latest @ExpressionAtlas bulk release is out, featuring 4562 datasets across 67 species. Explore 12 new plant datasets from sorghum, rice, Arabidopsis and maize, 🌾🌽 contributed by our @GrameneDatabase collaborators. Don't miss out! 🧬
🎉Edward Buckler, plant geneticist w/ @USDA_ARS & CALS adjunct prof, has been awarded the 2025 Barbara McClintock Prize for Plant Genetics & Genome Studies from the Maize Genetics Cooperation, a global org of maize geneticists & breeders. Congratulations! cals.cornell.edu/news/2024/10/p…
@GrameneDatabase System Maintenance on Saturday 24 August 2024, 12-8 PM ET to implement an upgrade to the core CSHL Network. Sorry for the inconvenience. Please plan working with our resources to minimize impact.
📢🌱The 2024 Multinational Arabidopsis Steering Committee (MASC) annual report is now available from arabidopsis.info/progreports.ht… 🌱 Gramene has proudly integrated @CLIMtools portals for GxE associations, @emblebi Single-Cell Expression Atlas data, and @BAR_PlantBio eFP browsers.
🌱Gramene Oryza Release 8 is live, featuring new pan-gene IDs from the PanOryza Project, 27M SNP rsIDs, and core collections from USDA & NARO! Dive into a new “Germplasm” tab for loss-of-function alleles. Check out the latest updates at shorturl.at/X18or! #RiceGenomics
SorghumBase and Gramene team members will be at ASPB sorghumbase.org/post/sorghumba…
The International Symposium on Rice Functional Genomics 2024 will be held September 9-11 in Little Rock, AR (isrfg2024.org). Of note: Travel Grants are available for USA based scientists - isrfg2024.org/travel-grants. Please apply!!
Makenzie Mabry demonstrating the power, and preciousness, of herbaria resources for plant science!
Congrats to @jrossibarra for this well deserved award and recognition. Brilliance, humanity and hard work 👏🏽🏆
@jrossibarra receives the @theNASciences prize in Food and Agriculture for his amaizing use of evolution to understand where we came from and where we can go!
Senior Bioinformatician Would you like to help ensure the global security of food supplies? In this new role you'll work alongside a group of bioinformaticians advancing #plantscience with #genomics @ensembl @emblebi #genomicsjobs #lifesciencejobs ➡️embl.org/jobs/position/…
Job Announcement: National Program Leader for USDA-ARS National Plant Germplasm System. Apply by 04/26/2024: usajobs.gov/job/783750200
Janeen Braynen gave a great talk on constructing gene regulatory networks and nitrogen use efficiency across maize and sorghum! Just part of another fascinating session at #MGM2024.
Gramene Vitis Release 4 is out with 11 New Grape Reference Genomes! vitis.gramene.org/main__grapevin…
Gramene Maize Release 4 is out with the teosinte Til11 genome and expression tracks from the MaizeCODE and NAM projects! maize-pangenome.gramene.org/main__maize__R4
One more week to apply for this exciting new post in my group. Retweets appreciated!
📣 DEADLINE EXTENDED for this new #vacancy with @irenepapatheodo at the Earlham Institute. The individual will join an active community of #genomics and #singlecell researchers working on functional implications of cellular heterogeneity. #DataScience okt.to/ST3b2M
The Planteome project is very pleased to announce the publication of our latest manuscript "Planteome 2024 Update: Reference Ontologies and Knowledgebase for Plant Biology." in Nucleic Acids Research journal. You can find it here: doi.org/10.1093/nar/gk…
academic.oup.com
Planteome 2024 Update: Reference Ontologies and Knowledgebase for Plant Biology
Abstract. The Planteome project (https://planteome.org/) provides a suite of reference and crop-specific ontologies and an integrated knowledgebase of plan
🎉Our site is back up and running! Many thanks to our systems admin and team on a speedy fix! Thank you for your patience during the downtime
🚨 Service Alert: We're experiencing a temporary disruption in Ensembl Genome Browser access and associated tools due to an unforeseen power failure in our server room. Our team is working to restore services ASAP. We appreciate your patience during this downtime. 🛠️
If you are at PAG and want to hear about CLIMtools, come to the Gramene workshop at 4pm in Palm 8
🌾 In our latest paper in Plant Communications we present Oryza CLIMtools—a new resource to explore climate-associated genetic variants in rice🌍🧬. We utilized these tools to evaluate the roles of G proteins in adapting to local climates @CLIMtools @GrameneDatabase @MPlantPCom
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