avash22's profile picture. Molecular Genetic Pathology Fellow @MGBpathology via @BIDMCpath @harvardmed| PhD @lab_hobbs @UTSW via @SaumyaDas_lab|

Avash Das, MBBS, PhD

@avash22

Molecular Genetic Pathology Fellow @MGBpathology via @BIDMCpath @harvardmed| PhD @lab_hobbs @UTSW via @SaumyaDas_lab|

Avash Das, MBBS, PhD 님이 재게시함

Spatial metabolic gradients in the liver and small intestine nature.com/articles/s4158…


Avash Das, MBBS, PhD 님이 재게시함

SpliceVarDB: A comprehensive database of experimentally validated human splicing variants. @markjcowley & co-workers report in @AJHGNews #ASHG25 hubs.li/Q03Nybxh0


Avash Das, MBBS, PhD 님이 재게시함

New Roche sequencer being tested for same-day genome interpretation in neonatal ICUs: "In the case of blood samples that arrived at the laboratory by 7 a.m., we obtained an interpreted report between 2 p.m. and 4:30 p.m. the same day." nejm.org/doi/full/10.10…

joe_pickrell's tweet image. New Roche sequencer being tested for same-day genome interpretation in neonatal ICUs:

"In the case of blood samples that arrived at the laboratory by 7 a.m., we obtained an interpreted report between 2 p.m. and 4:30 p.m. the same day."

nejm.org/doi/full/10.10…

Avash Das, MBBS, PhD 님이 재게시함

Systematic look at the functional and phenotypic effects of 'knockout' mutations in humans: "Proteomic and clinical impact of human knockouts in British South Asians" medrxiv.org/content/10.110…

joe_pickrell's tweet image. Systematic look at the functional and phenotypic effects of 'knockout' mutations in humans:

"Proteomic and clinical impact of human knockouts in British South Asians" medrxiv.org/content/10.110…

Avash Das, MBBS, PhD 님이 재게시함

A new world record for ultra rapid whole genome sequencing and interpretation for critically ill individuals @NEJM <4hrs nejm.org/doi/full/10.10…


Avash Das, MBBS, PhD 님이 재게시함

Hepatoid carcinoma -VIDEO!!!!!

All you need to know about hepatoid carcinomas. An editorial and a new study uncover NTRK alterations in hepatoid carcinomas and adenocarcinomas with enteroblastic differentiation. 📖🔬 Don't miss our latest insights! 🚀🧬jcp.bmj.com/content/early/… jcp.bmj.com/content/early/…



Avash Das, MBBS, PhD 님이 재게시함

Super excited re: first Shendure/Baker Lab collaboration & preprint on a multiplex sequencing-based strategy for screening de novo proteome editors in mammalian cells. Kudos to brilliant Chase Suiter & @Green_Ahn @UWproteindesign on the work! Preprint: biorxiv.org/content/10.110…

JShendure's tweet image. Super excited re: first Shendure/Baker Lab collaboration &amp;amp; preprint on a multiplex sequencing-based strategy for screening de novo proteome editors in mammalian cells. Kudos to brilliant Chase Suiter &amp;amp; @Green_Ahn @UWproteindesign on the work! Preprint:
biorxiv.org/content/10.110…
JShendure's tweet image. Super excited re: first Shendure/Baker Lab collaboration &amp;amp; preprint on a multiplex sequencing-based strategy for screening de novo proteome editors in mammalian cells. Kudos to brilliant Chase Suiter &amp;amp; @Green_Ahn @UWproteindesign on the work! Preprint:
biorxiv.org/content/10.110…

Avash Das, MBBS, PhD 님이 재게시함

Nature Methods: Choose your human genome reference wisely nature.com/articles/s4159…

tangming2005's tweet image. Nature Methods: Choose your human genome reference wisely nature.com/articles/s4159…

Avash Das, MBBS, PhD 님이 재게시함

IN @NatureRevEndo Early-onset colorectal cancer as an emerging disease of metabolic dysregulation nature.com/articles/s4157… @yincaoScD @MarcusDGon and colleagues

Aiims1742's tweet image. IN @NatureRevEndo 
Early-onset colorectal cancer as an emerging disease of metabolic dysregulation
nature.com/articles/s4157…
@yincaoScD @MarcusDGon and colleagues

Avash Das, MBBS, PhD 님이 재게시함

Important findings from our lab on colorectal cancer therapy. George Eng shows that APC-mutant tumors maintain a precise WNT signaling threshold. Driving activation beyond this point creates a selective therapeutic window. Preprint: biorxiv.org/content/10.110…


Avash Das, MBBS, PhD 님이 재게시함

#Throwback REVIEW | M Abu-Remaileh, @KivancBirsoy et al. Cellular and organismal function of choline metabolism nature.com/articles/s4225…


Avash Das, MBBS, PhD 님이 재게시함
jsantoyo's tweet image. Complex structural variant visualization with SVTopo. #GeneticVariants #StructuralVariants #VariantsVisualization #BMCgenomics
bmcgenomics.biomedcentral.com/articles/10.11…

Avash Das, MBBS, PhD 님이 재게시함

Whole genome sequencing with AVITI and NovaSeq X Plus reveals comparable performance with contextual biases biorxiv.org/content/10.110… #biorxiv_genomic


Avash Das, MBBS, PhD 님이 재게시함

T cell cholesterol transport links intestinal immune responses to dietary lipid absorption | Science science.org/doi/10.1126/sc…


Avash Das, MBBS, PhD 님이 재게시함

Why are there intronic reads in your bulk RNA-seq data? You're not alone—it's common, and the reasons are more layered than you think. Let’s break it down. 🧵

tangming2005's tweet image. Why are there intronic reads in your bulk RNA-seq data?
 You&apos;re not alone—it&apos;s common, and the reasons are more layered than you think.
 Let’s break it down. 🧵

Avash Das, MBBS, PhD 님이 재게시함

Sequence-independent 6mA methyltransferases for epigenetic profiling and editing dlvr.it/TNZNsh

TrendsGenetics's tweet image. Sequence-independent 6mA methyltransferases for epigenetic profiling and editing dlvr.it/TNZNsh

Avash Das, MBBS, PhD 님이 재게시함

Ubiquitin-mediated mitophagy regulates the inheritance of mitochondrial DNA mutations | Science science.org/doi/10.1126/sc…


Avash Das, MBBS, PhD 님이 재게시함

A genome-to-proteome map reveals how natural variants drive proteome diversity and shape fitness | Science science.org/doi/10.1126/sc…


Avash Das, MBBS, PhD 님이 재게시함

🚨 The older the sperm, the more likely it is to cause autism Sequencing sperm using nearly error-free sequencing → measure % sperm carrying disease-causing mutations: 2% at age 30 → 4.5% at 70 Most were autism genes New paper in @Nature today 🧵

therealRYC's tweet image. 🚨 The older the sperm, the more likely it is to cause autism

Sequencing sperm using nearly error-free sequencing → measure % sperm carrying disease-causing mutations:

2% at age 30 → 4.5% at 70 

Most were autism genes 

New paper in @Nature today 🧵

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