
Zoe Anne Dyson
@msmicrobiocode
Assistant Professor @LSHTM. Co-Deputy Director @LSHTM_datastats. Editor @mSystemsJ. Coordinator @TyphiNET. Pathogen genomics & genetic epidemiology. She/her.
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I am pleased to share our @TyphiNET AMR surveillance dashboard is now published in Genome Medicine: genomemedicine.biomedcentral.com/articles/10.11…
🚨New preprint 🚨 Introducing our @TyphiNET #AMR surveillance dashboard for #typhoid 🧵1/12 biorxiv.org/content/10.110…
📰 New publication! Read up on the @TyphiNET data visualisation dashboard in @GenomeMedicine. The dashboard provides an interactive platform for accessing genome-derived data on pathogen variant frequencies to inform #typhoid control and intervention strategies. #TakeOnTyphoid…
@msmicrobiocode won the Staff Prize for her work revealing that most AMR typhoid infections in Bangladesh, Nepal, and Malawi are driven by ongoing local transmission of existing resistant strains—not new variants.

📣 🎉 Congratulations to @gia_pangga and @msmicrobiocode on winning our 2025 Publication Prize at @LSHTM 🏆 Read more about their winning papers and impactful AMR research🔬 👇 bit.ly/4iM7uCh

WHO study lists top endemic pathogens for which new vaccines are urgently needed @WHO who.int/news/item/05-1…
📢 Wrapping up the #AMRDataSymposium with our final panel discussion: “AMR Data for Policy—AMR Data to Support Global AMR Policy.” Experts are highlighting how data-driven insights can shape effective policies and drive global action against #AMR. 🌍

🗣️ Kicking off the #AMRDataSymposium with opening remarks from our Co-Directors, @gmknght & @DrKatHolt , as they set the stage for a day of discussions on the power of data in combating #AMR. Stay tuned for valuable insights!


Still at the #AMRDataSymposium, @meganecarey is leading the panel discussion titled, ‘How We Share #AMR Data Nationally & Internationally.’ 🤝 Experts are exploring solutions to enhance collaboration and transparency in data sharing.


🧩 @msmicrobiocode is chairing the flash talks on AMR data tools! 💡 Speakers are showcasing innovative tools and methodologies that enhance #AMR data collection and analysis. #AMRDataSymposium




Also out this week: multiparameter #evolution training of #phage to target #Pseudomonas for improved cocktails in #phagetherapy. #publication in @NatureComms with Kunisch etal: nature.com/articles/s4146… #microbiology #bacteria

New preprint from @TyphiNET! Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi biorxiv.org/content/10.110…
Great to see so many long term colleagues and friends on this paper. I remember the origins of STRATAA at the @wellcometrust. Came after we pointed out a gap and an opportunity. It has delivered.
New research article Pathogen diversity and antimicrobial resistance transmission of #Salmonella enterica serovars Typhi and Paratyphi A in Bangladesh, Nepal, and Malawi: a genomic epidemiological study thelancet.com/journals/lanmi… #AMR #typhoid #OpenAccess #OA

New research alert 🔔 A study in @LancetMicrobe by @msmicrobiocode reveals high levels of drug-resistant typhoid in Bangladesh, Nepal, and Malawi. Calls for increased focus on vaccination and WASH to combat this public health threat. Read more👇 bit.ly/45X8mz0

Lovely work from the STRATAA consortium, led by @msmicrobiocode @flashton & @DrKatHolt. Consistent community surveillance in Africa and Asia dissected the behaviour of highly localised clusters of S. Typhi w/ AMR spreading between age groups and lasting over several seasons.
New research article Pathogen diversity and antimicrobial resistance transmission of #Salmonella enterica serovars Typhi and Paratyphi A in Bangladesh, Nepal, and Malawi: a genomic epidemiological study thelancet.com/journals/lanmi… #AMR #typhoid #OpenAccess #OA

How can these findings help to #TakeOnTyphoid? Data found drug resistant transmission and patterns, highlighting the importance for decision-makers to take strategic action to protect communities! #Typhoid conjugate #VaccinesWork to protect against drug resistant strains💉…
NEW: A recently published genomics study looks at drug resistant #typhoid in #Bangladesh, #Nepal, and #Malawi🦠 sciencedirect.com/science/articl… @LancetMicrobe @msmicrobiocode @jamesmeiring #TakeOnTyphoid
New research article Pathogen diversity and antimicrobial resistance transmission of #Salmonella enterica serovars Typhi and Paratyphi A in Bangladesh, Nepal, and Malawi: a genomic epidemiological study thelancet.com/journals/lanmi… #AMR #typhoid #OpenAccess #OA

Salmonella typhi H58 likely emerged from a chronic carrier in India before spreading globally as investigated by isolates from travelers to UK between 1980 and 1995 @meganecarey @ToNguyen90 @msmicrobiocode @SatheesNair @MarieChattaway doi.org/10.1038/s42003…
The ability of H58 to acquire & maintain AMR genes continues to pose a threat, as the emergence and spread of #XDR typhoid in Pakistan has demonstrated. Continued & expanded 🧬surveillance is needed to inform #TCV introduction and measure its impact #VaccinesWork
🔉Out today in @CommsBio - our genomic analysis of earliest H58 S. Typhi organisms isolated from returning travellers to the UK suggests this highly successful lineage emerged in 1987 in India, likely from a chronic carrier, and was already MDR. nature.com/articles/s4200…

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