#phylogenetics search results
I am thrilled to announce that in just a few months I will be joining the Dpt. of Ecology and Evolution Biology @Princeton as Assistant Professor! Stay tuned for postdoc & PhD opportunities in #phylogenetics and #macroevolution using phenotypes, genomes, and fossils very soon!
Spread the word! Free Software new version is now out: TreeViewer version 2.2.0! #Phylogenetics Plot multiple age distributions, spreadsheet editor, lots of examples and more! Download from treeviewer.org
AleRax: a tool for gene and species tree co-estimation and reconciliation under a probabilistic model of gene duplication, transfer, and loss #phylogenetics #software #biology #genomics #evolution
PhyKIT, version 1.13.0, now has a function to calculate compositional biases in individual taxa — see the RCVT `pk_rcvt -h` to read more #Software #bioinformatics #phylogenetics #evolution #phylogenomics #genetics #biology
Happy to announce that our paper : TreeViewer version 2.2.0 is out with Dr. Giorgio Bianchini! @Ecol_Evol Free Software plotting age distributions, spreadsheet editor, publication quality phylogenies, and more. #Phylogenetics Publication: shorturl.at/nwKN6
ClipKIT now supports Python version 3.11 #Software #bioinformatics #phylogenetics #evolution #phylogenomics #genetics #biology
"Hey Chat GPT, write an ironic poem about #phylogenetics in the style of #DorothyParker" This is pretty darn good.....
You requested, we listened 😊😊 ClipKIT, version 2.1.3, now has the option to conduct codon-based trimming #Software #bioinformatics #phylogenetics #evolution #phylogenomics #genetics #biology
Calotomus! A buck-toothed parrotfish, with snaggly teeth not fused into a beak like most parrotfishes. This is key anatomical evidence of the scarines being nested within wrasses, requiring rejection of their classical family status and name. #phylogenetics #backdatwrasseup
Students can get all kinds of different skills from our classes.... Here an undergrad in my grad #phylogenetics class presents her tanglegram #shiny web app. She'd never coded in R (or shiny) prior to our course! PS, her app is live & totally works: cgeezman.shinyapps.io/cophyloapp/!
Interested in #phylogenetics using whole #genome/#transcriptome/#proteome data? @C__Hahn and I are very happy to share phylociraptor with you: It facilitates explorative and reproducible phylogenomic analyses of thousands of genes and genomes. Preprint: tinyurl.com/yc4f7v6d
Attending #GSA2023 and interested in #fossils and #phylogenetics? Come check out my talk at the crack of dawn (8:05 am) tomorrow in Room 301/302. And then stick around for the rest of what is bound to be a fantastic session on all things #computational #paleobiology!
Wei et al explore the fascinating world of #weasel #taxonomy, undertaking a comprehensive analysis of the #phylogenetics of this widely distributed and diverse Mustelidae lineage. Explore the findings-and meet a new species! doi.org/10.1111/jse.70… @WileyEcology #systematics
Still disbelief but absolute joy that I successfully defended my PhD on #beetle #phylogenetics @ImperialLifeSci and now to really stay the course for a lifetime study on the #carabidae but first Black Forest gateaux @TheWolseley
This is how we ended our #phylogenetics workshop today at @Biology_LU of @lunduniversity in Sweden -- writing a custom function to plot a phylogeny in #Rstats!
All tangled up: Unraveling #phylogenetics & reticulate evolution in the vining #ferns, Lygodium (Schizaeales) New #AJB research by @ja_pelosi, Bethany Zumwalde, @westo_fernnerd, @ebsessa, et al. doi.org/10.1002/ajb2.1… #botany #polyploidy @wileyplantsci @wileyplantsci
#Leaf #evolution: integrating #phylogenetics, developmental dynamics, and genetic insights across #land #plants 📖 buff.ly/rhBlpc6 #TansleyReview by Hokuto Nakayaman and Neelima R. Sinha @WileyPlantSci #PlantScience
Wei et al explore the fascinating world of #weasel #taxonomy, undertaking a comprehensive analysis of the #phylogenetics of this widely distributed and diverse Mustelidae lineage. Explore the findings-and meet a new species! doi.org/10.1111/jse.70… @WileyEcology #systematics
A phylogenetic analysis of Tui Chubs (Siphateles spp.) from the Great Basin, focusing on refining their taxonomic classification: doi.org/10.3897/zookey… #fishes #phylogenetics #ichthyology @ucdavis @CaliforniaDFW
📢 Our paper "Learning the language of phylogeny with MSA Transformer" is out in @CellSystemsCP! A big thank you to both my collaborators and my mentors. 😭 @gabefoley @mikaelboden 🔗 cell.com/cell-systems/a… #bioinformatics #phylogenetics #MSATransformer #AIforScience
📖Highly Cited Paper: 🦈Systematics and Phylogenetic Interrelationships of the Enigmatic Late Jurassic Shark Protospinax annectans Woodward, 1918 with Comments on the Shark–Ray Sister Group Relationship 👥P.L. Jambura et al. 🔗brnw.ch/21wXpDp #phylogenetics
Exploring Avian Influenza Viruses in Yakutia-The Largest Breeding Habitat of Wild Migratory Birds in Northeastern Siberia by Kasianov et al. 👉mdpi.com/1999-4915/17/5… #influenza #phylogenetics #surveillance #evolution
Come join the Workshop on Phylogenomics in Cesky Krumlov, Czechia, from January 25 through February 7, 2026! Applications close November 15 (see application link in the reply!) #phylogenetics #evolution #genomics #ai
🤏Small details,💥big results! Liu et al.'s work on #molecular #phylogenetics and trait-dependent #biogeography offers insights into the dispersal of Meiogyne (Annonaceae) across the Australasia–Pacific region. 🌏doi.org/10.1111/jse.70… @WileyEcolEvol #evolution #PlantSci
📝Don’t miss your chance to join the Taxonomy Conference for Free!📝 Register for Free by 27 November 2025 bit.ly/3Wuw41x to participate in the IOCTX2025 Conference (3 to 4 December 2025, CET, Online). 🌐 More info: bit.ly/4bY2bOn #Taxonomy #Phylogenetics
#Leaf #evolution: integrating #phylogenetics, developmental dynamics, and genetic insights across #land #plants 📖 buff.ly/rhBlpc6 #TansleyReview by Hokuto Nakayaman and Neelima R. Sinha @WileyPlantSci #PlantScience
🐍 A new reed snake species is described from Mountain Jinuo in China. Learn all about it here: doi.org/10.3897/zookey… #phylogenetics #taxonomy #snakes
Question for the #phylogenetics hive mind. What freely available phylogenetics programmes are out there that will work on iPads with morphological character based data? This is for a 200 level evolutionary biology lab working with bird skulls.
🔗 A quartet-based approach for inferring phylogenetically informative features from genomic and phenomic data. DOI: doi.org/10.1016/j.csbj… 📚 CSBJ: csbj.org #Bioinformatics #Phylogenetics #Genomics #Phenomics #Evolution #ComputationalBiology #AI @CSB_Journal
We’ll explore how Bayesian approaches help us estimate evolutionary relationships and divergence times from molecular data. transmittingscience.com/courses/evolut… #TScourses #KeepLearning #Phylogenetics #BayesianMethods
Even more complicated than your family #tree! Check out the latest in #gymnosperm #phylogenetics from @JournalSysEvo!
Family #tree level: Expert! Wu et al. use #phylogenomics to shed light on the complex #evolutionary history of the #gymnosperm genus Cupressus, revealing East Asian–Tethyan disjunction. doi.org/10.1111/jse.13… @WileyEcolEvol @wileyplantsci #plant #systematics #JSE #cypress
Latest Special Issue on #EvolutionaryBiology💡 Genetics and Evolutionary Biology of Aquatic Organisms🪼🧬 Guest Editors: Drs. Qianhong Gu and Liang Guo - Hunan Normal University🏫 Link: mdpi.com/si/253484 #Biology #Phylogenetics #Genetics #Zoology #Evolution #AquaticLife
Protein Structural Phylogenetics #proteins #phylogenetics @GenomeBiolEvol academic.oup.com/gbe/article/17…
academic.oup.com
Protein Structural Phylogenetics
Abstract. Protein structural phylogenetics is an interdisciplinary branch of molecular evolution that (i) uses 3D structural data to trace evolutionary his
A major contribution to the knowledge of the pit viper genu Gloydius found in North Korea, a nation that has been largely inaccessible for field research: doi.org/10.3897/zookey… #ecology #phylogenetics #snakes @YucheolS
Belated announcement that our NEW PAPER on #phylogenetics #timetree inference for #branchiopod #crustaceans is out and #OpenAccess 🦐🧬this was an outstanding work from my former master student @NickRighetti98 & I couldnt be more proud🥹 Check it out 👇 doi.org/10.11646/palae…
Interested in #phylogenetics using whole #genome/#transcriptome/#proteome data? @C__Hahn and I are very happy to share phylociraptor with you: It facilitates explorative and reproducible phylogenomic analyses of thousands of genes and genomes. Preprint: tinyurl.com/yc4f7v6d
I am thrilled to announce that in just a few months I will be joining the Dpt. of Ecology and Evolution Biology @Princeton as Assistant Professor! Stay tuned for postdoc & PhD opportunities in #phylogenetics and #macroevolution using phenotypes, genomes, and fossils very soon!
BioKIT now supports Python versions 3.9 and 3.10 #software #bioinformatics #phylogenetics #evolution #phylogenomics #genetics #biology #bioinformatics
Wei et al explore the fascinating world of #weasel #taxonomy, undertaking a comprehensive analysis of the #phylogenetics of this widely distributed and diverse Mustelidae lineage. Explore the findings-and meet a new species! doi.org/10.1111/jse.70… @WileyEcology #systematics
OrthoSNAP now supports Python versions 3.9 and 3.10 #software #bioinformatics #phylogenetics #evolution #phylogenomics #genetics #biology #bioinformatics
AleRax: a tool for gene and species tree co-estimation and reconciliation under a probabilistic model of gene duplication, transfer, and loss #phylogenetics #software #biology #genomics #evolution
PhyKIT, version 1.13.0, now has a function to calculate compositional biases in individual taxa — see the RCVT `pk_rcvt -h` to read more #Software #bioinformatics #phylogenetics #evolution #phylogenomics #genetics #biology
orthofisher now supports Python versions 3.9 and 3.10 #SoftwareDevelopment #bioinformatics #phylogenetics #evolution #phylogenomics #genetics #biology #bioinformatics
ClipKIT now supports Python version 3.11 #Software #bioinformatics #phylogenetics #evolution #phylogenomics #genetics #biology
You requested, we listened 😊😊 ClipKIT, version 2.1.3, now has the option to conduct codon-based trimming #Software #bioinformatics #phylogenetics #evolution #phylogenomics #genetics #biology
Visualise constructing evolutionary trees that tell the story of life's diversity. Join others in exploring the evolutionary history using BEAST2. 🌳🔍 If you’re intrigued, you can register here: transmittingscience.com/courses/evolut… #TScourses #KeepLearning #Phylogenetics #BayesianInference
#Leaf #evolution: integrating #phylogenetics, developmental dynamics, and genetic insights across #land #plants 📖 buff.ly/rhBlpc6 #TansleyReview by Hokuto Nakayaman and Neelima R. Sinha @WileyPlantSci #PlantScience
Spread the word! Free Software new version is now out: TreeViewer version 2.2.0! #Phylogenetics Plot multiple age distributions, spreadsheet editor, lots of examples and more! Download from treeviewer.org
Happy to announce that our paper : TreeViewer version 2.2.0 is out with Dr. Giorgio Bianchini! @Ecol_Evol Free Software plotting age distributions, spreadsheet editor, publication quality phylogenies, and more. #Phylogenetics Publication: shorturl.at/nwKN6
Attending #GSA2023 and interested in #fossils and #phylogenetics? Come check out my talk at the crack of dawn (8:05 am) tomorrow in Room 301/302. And then stick around for the rest of what is bound to be a fantastic session on all things #computational #paleobiology!
"Hey Chat GPT, write an ironic poem about #phylogenetics in the style of #DorothyParker" This is pretty darn good.....
This is how we ended our #phylogenetics workshop today at @Biology_LU of @lunduniversity in Sweden -- writing a custom function to plot a phylogeny in #Rstats!
🤩 The first new black coral family🪸 discovered in 18 years, published in our journal: doi.org/10.3897/zookey… #deepsea #fauna #phylogenetics @RadicalMicrobe @quattrinia @NMNH @whoi
The complex history of the dissimilatory sulfite reduction (Dsr) pathway has been marked by multiple horizontal gene transfer events. #evolution #geomicrobiology #phylogenetics sciencedirect.com/science/articl…
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