#bioconductor search results
Found this really nice timeline about the history of #rstats. It is very interesting how #bioconductor is created just one year after the stable version of R. And RStudio first release happens only in 2011, 4 years after Hadley's ggplot2! Source: mdpi.com/1606768
Scafari: Exploring scDNA-seq data. #scRNAseq #Bioconductor #QC #VariantAnalysis #Visualization #Bioinformatics academic.oup.com/bioinformatics…
Just kicked off our 5-day course on scRNAseq with R/Bioconductor! #scRNAseq #Rstats #Bioconductor #Genomics #Bioinformatics
Enriching experience at CSAMA2024 summer school for biological data science. Thanks #bioconductor society for organizing this and hosting us at beautiful #bressanone, Italy. It was a pleasure to learn directly from developers of R, and other various helpful tools!
The tidyomics ecosystem: enhancing omic data analyses. #OmicsData #Bioconductor #TidyR @TonyPapenfuss @mikelove @steman_research @naturemethods nature.com/articles/s4159…
#30DayChartChallenge #day29 Monochrome Inspired by my talk this week on omics data reanalysis I decided to compare the monthly downloads of the {limma}, {edgeR} and {DESeq2} packages from #Bioconductor. #rstats #dataviz #ggplot2 #Bioinformatics
Wonderful end to #BioCAsia2023 #HKBioinfoSymposium let’s keep up the moment in building the #bioconductor community in Asia, and the #bioinformatics community in #HK!
Many thanks to Dr. Alice Yue and all attendees for making the first edition of the Flow Cytometry analysis in R/Bioconductor a great success! Best of luck with the analysis of your data! #Rstats #Bioconductor #flowcytometry
The second set of parallel workshops focuses on: 🔵 @galaxyproject from the service perspective 🔵 #Bioconductor & ELIXIR co-develop training infrastrucure 🔵 Beacon network version 2 @genomebeacons 🔵 Data Stewardship Wizard 🔵 #FAIRdata with @BioSchemas & RO-Crate #ELIXIR23
Seems #Bioconductor (and #Biopython) usage has waned over the last decade. What are people using instead in 2024? 🤔 #bioinformatics
Registrations are now open for the next edition of the #Metabolomics with R and #Bioconductor course. physalia-courses.org/courses-worksh…
A few of my favorite shots from last week's #CSAMA2023, based in Bressanone/Brixen. It was a unique opportunity to meet the developers of #Bioconductor and bother them with my small questions (thank you 🙏). And besides the science part, just look at those views!
New package: annmatrix - a minimal matrix-based #rstats alternative to #BioConductor AnnotatedDataFrame and SummarizedExperiment objects. Requires R v4.3.0 or above. github.com/karoliskoncevi…
🚀Excited to share our pre-print on @bioRxiv! scider: a Bioconductor tool using kernel density-based ROI & contour detection to preserve tissue structure and reveal hidden heterogeneity in spatial transcriptomics. #SpatialTranscriptomics #Bioinformatics #Bioconductor
Preserving tissue structure through density-based spatial analysis with scider biorxiv.org/content/10.110… #biorxiv_bioinfo
📣 Passionate about #Bioconductor? 🌟 🧬💻 We're looking for new members for our Technical Advisory Board! If you or someone you know would make a great addition, check out the details & apply here support.bioconductor.org/p/9151209/ Let's shape the future of #bioinformatics together 🤝
Destripar objetos S4/R6 de #bioconductor para sacarles la data y poder trabajarlos #Tidy es mi pasión
drawProteins: a new #Bioconductor/ #R package for generation of #protein schematics #UsingEnsembl #BioMart @F1000Research @Bioconductor @uniprot buff.ly/2AbKble
Found this really nice timeline about the history of #rstats. It is very interesting how #bioconductor is created just one year after the stable version of R. And RStudio first release happens only in 2011, 4 years after Hadley's ggplot2! Source: mdpi.com/1606768
A step-by-step guide to analyzing CAGE data using #Rstats #bioconductor f1000research.com/articles/8-886…
.@davisjmcc talking about single cell genetics and dressed in style with the scater #bioconductor hexsticker #BiocAsia
pcaExplorer: #Rstats #bioconductor pkg for interacting with RNA-seq principal components bmcbioinformatics.biomedcentral.com/articles/10.11… bioconductor.org/packages/pcaEx…
The first day of the very first virtual edition of the European #Bioconductor Conference! 🎙Join us for a full week of keynotes, talks, and incredible posters and workshops Sponsored by @RConsortium @F1000Research Statistics Dep @UniPadova With the patronage of @DiBio_UniPD
Our new paper regarding bioconductor package MLSeq is out. The package applies several machine learning methods, including SVM, bagSVM, Random Forest and CART to RNA-Seq data. Package: bioconductor.org/packages/relea… Paper: sciencedirect.com/science/articl… #rstats #bioinformatics #bioconductor
projectR: #Rstats #bioconductor pkg for transfer learning via PCA, NMF, correlation, and clustering biorxiv.org/content/10.110… github.com/genesofeve/pro…
Submitted "TREG" my first #Bioconductor package today!!! 🎉 This has been a fun and challenging process. Shout out to @lcolladotor for a ton of guidance 😎 Check out our work finding Total RNA Expression Genes here: research.libd.org/TREG
Just kicked off our 5-day course on scRNAseq with R/Bioconductor! #scRNAseq #Rstats #Bioconductor #Genomics #Bioinformatics
The tidyomics ecosystem: enhancing omic data analyses. #OmicsData #Bioconductor #TidyR @TonyPapenfuss @mikelove @steman_research @naturemethods nature.com/articles/s4159…
.@mt_morgan highlighting the BiocManger::install() function to install new #Bioconductor packages #BioCAsia
Join us in October to learn how to create R/Bioconductor packages for #Genomics 📦🧬📊 physalia-courses.org/courses-worksh… #Rstats #Bioconductor #Genomics #Bioinformatics #DataScience
There are the last seats available on the Gene Set Enrichment Analysis in R with @jokergoo_gu in May. If interested, please have a look at physalia-courses.org/courses-worksh… #rstats #Genomics #bioconductor #DataScience #Bioinformatics #datavisualization #GSEA
Great talk by @lmwebr at @jhubiostat @JohnsHopkinsSPH from @markrobinsonca’s group Learned about computational benchmarking and high throughout cytometry data He’s a great #openscience #rstats #bioconductor developer and advocate
Scafari: Exploring scDNA-seq data. #scRNAseq #Bioconductor #QC #VariantAnalysis #Visualization #Bioinformatics academic.oup.com/bioinformatics…
Excited to meet @trashystats in person and even more excited to hear about dtangle! #BiocAsia #Bioconductor
The moment when your #rstats #bioconductor package passes not only R CMD Check, but also the R CMD BiocCheck with zero errors and warnings for the first time 🥳
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