#cellcellcommunication search results
1/ 📢 New protocol paper for #CellCellCommunication! Our manuscript presents a pipeline for robust and generalizable cell-cell communication analysis of complex single-cell datasets, combining the best of LIANA & Tensor-cell2cell! 💥🔬 #CompBio #SingleCell doi.org/10.1101/2023.0…
Follow @WebEVTalk to keep up to date with this new online seminar series covering everything extracellular vesicle related #EVs #Exosomes #CellCellCommunication #WebEVTalk
The #AMICI 🤝 tutorial is out! Bringing #attention to #cellcellcommunication 🚨👉 amici-st.readthedocs.io/en/latest/ #spatialtranscriptomics #compbio #machinelearning
amici-st.readthedocs.io
AMICI: Attention Mechanism Interpretation of Cell-cell Interactions
License Documentation Status PyPI version AMICI Framework Cross-attention-based cell-cell interaction inference from spatial transcriptomics data. Contents:: AMICI Quick Start Tutorial- Load the an...
1/ I’m excited to share recent work on inferring cell-cell interactions using attention by @justjhong and me, supervised by @elhamazizi. Open the thread 🧵for a brief tweetorial of our method. bioRxiv link: biorxiv.org/content/10.110…
Huge congrats to Dr. Na Sun @nasun818, appointed inaugural AI fellow at the @WhiteheadInst Whitehead Institute. "Initially, my Whitehead Institute laboratory will continue to apply and develop new computational methods to decipher #CellCellCommunication in the brain and their…
Whitehead Institute appoints Na Sun as the inaugural AI Fellow within the Whitehead Fellows Program. In this role, Na will develop computational methods to decipher complex cell-cell communication in the brain. Welcome, Na! wi.mit.edu/news/computati…
Welcome to our most recent #PhD candidate 👩⚕️ @FrancescaPTKD will be working on #microfluidic solutions to study #cellcellCommunication and paracrine signaling crosstalk at the #perivascular niche 🦠 Good luck with your new journey 💪 @KU_Leuven @biosystkuleuven
Recently published #CancerResearch: Systematic comparison of 16 #CellCellCommunication resources and 7 methods for #SingleCell data by @saezlab @NatResCancer go.nature.com/3O4OWyn
News &Views discussing the latest implementation of the computational tool #CellPhoneDB for inferring #cellcellcommunication from #singlecelldata bit.ly/42gSmXi
nature.com
Advancing cell–cell communication analysis from single-cell genomics data
Nature Protocols - CellPhoneDB infers cell–cell communication by integrating single-cell genomics data with a curated database of ligand–receptor interactions. Now, a Protocol Update...
scConnect: a method for exploratory analysis of cell-cell communication based on single cell RNA sequencing data. #scRNAseq #CellCellCommunication #ExploratoryAnalysis academic.oup.com/bioinformatics… #Bioinformatics
We are live! Today marks a new chapter for Moleculent as we step into the spotlight. With a commitment to innovation, we're ready to reshape how the world understands cellular communication. bit.ly/4b0KLhE #discoverfunction #cellcellcommunication #immunooncology
🙏 Grateful for the great engagement at our #CellCellCommunication #tutorial at #ISMBECCB2025! See you next week in #Liverpool in person!👋 Organizers: @GiuliaCesaro4, @shin_nagai, Mayra Ruiz, @vanvanka123 , Giacomo Baruzzo, Barbara Di Camillo
Plants secrete membrane-bound extracellular vesicles, which mediate cell-to-cell communication. This paper provides methods for isolation and purification of plant extracellular vesicles. In @JIPBio ➡️ ow.ly/pT0K50GL9pX
#NewNProt for unraveling #cellcellcommunication with #NicheNet by inferring active ligands from #transcriptomics data bit.ly/41FP0xK @saeyslab
nature.com
Unraveling cell–cell communication with NicheNet by inferring active ligands from transcriptomics...
Nature Protocols - NicheNet is a computational tool to infer the ligand–receptor interactions that potentially regulate gene expression changes in receiver cell populations, by producing a...
We've realized for this system a special custom design in order to accept the users' microfluidic device that allows to independently induce dynamic chemical stimulation and #cytoskeleton reorganization on the stand-alone cells to exclude the effect of #cellcellcommunication.
A huge thanks to the organizers @CellcommOrg for this and @LeeRubinLab for the support! Excited to be a part of such a great worldwide community interested in #cellcellcommunication! cellcomm.org
cellcomm.org
cellcomm.org
cellcomm.org A COMMUNITY-WIDE STUDY OF CELL-CELL COMMUNICATION Cell-cell communication is a fundamental aspect of biology and medicine. It makes multicellular life possible and it affects disease. A...
The first Cell-Cell Communication Prize for early career scientists (2022) has been awarded to: Cassandra Burdziak (Advisor: Dana Pe’er) Patrick Schriek (Advisors: Justine Mintern and Jose Villadangos) Richard Giadone (Advisor: Lee Rubin) cellcomm.org/prize
🔗 Paper: doi.org/10.1093/bib/bb… 🌐 Catalogue: sysbiobig.gitlab.io/ccc-catalog In collaboration with @vanvanka123 @CaluraEnrica #SingleCell #Bioinformatics #CellCellCommunication #CCC #ComputationalBiology
The #AMICI 🤝 tutorial is out! Bringing #attention to #cellcellcommunication 🚨👉 amici-st.readthedocs.io/en/latest/ #spatialtranscriptomics #compbio #machinelearning
amici-st.readthedocs.io
AMICI: Attention Mechanism Interpretation of Cell-cell Interactions
License Documentation Status PyPI version AMICI Framework Cross-attention-based cell-cell interaction inference from spatial transcriptomics data. Contents:: AMICI Quick Start Tutorial- Load the an...
1/ I’m excited to share recent work on inferring cell-cell interactions using attention by @justjhong and me, supervised by @elhamazizi. Open the thread 🧵for a brief tweetorial of our method. bioRxiv link: biorxiv.org/content/10.110…
🙏 Grateful for the great engagement at our #CellCellCommunication #tutorial at #ISMBECCB2025! See you next week in #Liverpool in person!👋 Organizers: @GiuliaCesaro4, @shin_nagai, Mayra Ruiz, @vanvanka123 , Giacomo Baruzzo, Barbara Di Camillo
🔗 Paper: doi.org/10.1093/bib/bb… 🌐 Catalogue: sysbiobig.gitlab.io/ccc-catalog In collaboration with @vanvanka123 @CaluraEnrica #SingleCell #Bioinformatics #CellCellCommunication #CCC #ComputationalBiology
News &Views discussing the latest implementation of the computational tool #CellPhoneDB for inferring #cellcellcommunication from #singlecelldata bit.ly/42gSmXi
nature.com
Advancing cell–cell communication analysis from single-cell genomics data
Nature Protocols - CellPhoneDB infers cell–cell communication by integrating single-cell genomics data with a curated database of ligand–receptor interactions. Now, a Protocol Update...
#NewNProt for unraveling #cellcellcommunication with #NicheNet by inferring active ligands from #transcriptomics data bit.ly/41FP0xK @saeyslab
nature.com
Unraveling cell–cell communication with NicheNet by inferring active ligands from transcriptomics...
Nature Protocols - NicheNet is a computational tool to infer the ligand–receptor interactions that potentially regulate gene expression changes in receiver cell populations, by producing a...
Huge congrats to Dr. Na Sun @nasun818, appointed inaugural AI fellow at the @WhiteheadInst Whitehead Institute. "Initially, my Whitehead Institute laboratory will continue to apply and develop new computational methods to decipher #CellCellCommunication in the brain and their…
Whitehead Institute appoints Na Sun as the inaugural AI Fellow within the Whitehead Fellows Program. In this role, Na will develop computational methods to decipher complex cell-cell communication in the brain. Welcome, Na! wi.mit.edu/news/computati…
We are live! Today marks a new chapter for Moleculent as we step into the spotlight. With a commitment to innovation, we're ready to reshape how the world understands cellular communication. bit.ly/4b0KLhE #discoverfunction #cellcellcommunication #immunooncology
1/ 📢 New protocol paper for #CellCellCommunication! Our manuscript presents a pipeline for robust and generalizable cell-cell communication analysis of complex single-cell datasets, combining the best of LIANA & Tensor-cell2cell! 💥🔬 #CompBio #SingleCell doi.org/10.1101/2023.0…
A huge thanks to the organizers @CellcommOrg for this and @LeeRubinLab for the support! Excited to be a part of such a great worldwide community interested in #cellcellcommunication! cellcomm.org
cellcomm.org
cellcomm.org
cellcomm.org A COMMUNITY-WIDE STUDY OF CELL-CELL COMMUNICATION Cell-cell communication is a fundamental aspect of biology and medicine. It makes multicellular life possible and it affects disease. A...
The first Cell-Cell Communication Prize for early career scientists (2022) has been awarded to: Cassandra Burdziak (Advisor: Dana Pe’er) Patrick Schriek (Advisors: Justine Mintern and Jose Villadangos) Richard Giadone (Advisor: Lee Rubin) cellcomm.org/prize
Welcome to our most recent #PhD candidate 👩⚕️ @FrancescaPTKD will be working on #microfluidic solutions to study #cellcellCommunication and paracrine signaling crosstalk at the #perivascular niche 🦠 Good luck with your new journey 💪 @KU_Leuven @biosystkuleuven
Recently published #CancerResearch: Systematic comparison of 16 #CellCellCommunication resources and 7 methods for #SingleCell data by @saezlab @NatResCancer go.nature.com/3O4OWyn
Plants secrete membrane-bound extracellular vesicles, which mediate cell-to-cell communication. This paper provides methods for isolation and purification of plant extracellular vesicles. In @JIPBio ➡️ ow.ly/pT0K50GL9pX
scConnect: a method for exploratory analysis of cell-cell communication based on single cell RNA sequencing data. #scRNAseq #CellCellCommunication #ExploratoryAnalysis academic.oup.com/bioinformatics… #Bioinformatics
We've realized for this system a special custom design in order to accept the users' microfluidic device that allows to independently induce dynamic chemical stimulation and #cytoskeleton reorganization on the stand-alone cells to exclude the effect of #cellcellcommunication.
Follow @WebEVTalk to keep up to date with this new online seminar series covering everything extracellular vesicle related #EVs #Exosomes #CellCellCommunication #WebEVTalk
1/ 📢 New protocol paper for #CellCellCommunication! Our manuscript presents a pipeline for robust and generalizable cell-cell communication analysis of complex single-cell datasets, combining the best of LIANA & Tensor-cell2cell! 💥🔬 #CompBio #SingleCell doi.org/10.1101/2023.0…
Follow @WebEVTalk to keep up to date with this new online seminar series covering everything extracellular vesicle related #EVs #Exosomes #CellCellCommunication #WebEVTalk
Recently published #CancerResearch: Systematic comparison of 16 #CellCellCommunication resources and 7 methods for #SingleCell data by @saezlab @NatResCancer go.nature.com/3O4OWyn
Welcome to our most recent #PhD candidate 👩⚕️ @FrancescaPTKD will be working on #microfluidic solutions to study #cellcellCommunication and paracrine signaling crosstalk at the #perivascular niche 🦠 Good luck with your new journey 💪 @KU_Leuven @biosystkuleuven
We are live! Today marks a new chapter for Moleculent as we step into the spotlight. With a commitment to innovation, we're ready to reshape how the world understands cellular communication. bit.ly/4b0KLhE #discoverfunction #cellcellcommunication #immunooncology
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