#transcriptome wyniki wyszukiwania
Interested in #phylogenetics using whole #genome/#transcriptome/#proteome data? @C__Hahn and I are very happy to share phylociraptor with you: It facilitates explorative and reproducible phylogenomic analyses of thousands of genes and genomes. Preprint: tinyurl.com/yc4f7v6d
💥Excited for the publication: "Integrative #Bioinformatics-Guided Analysis of #Glomerular #Transcriptome Implicates Potential Therapeutic Targets and Pathogenesis Mechanisms in #IgA #Nephropathy" 🔗 brnw.ch/21wX4TW #Biomarkers #Immunology #machinelearning
Fabulous & fascinating talk as always by @LucyKornblith at #THOR2023 on the curious case of the platelet in trauma and what’s happening with the platelet #transcriptome - always a delight to learn from you, Lucy!
New in @The_InnovationJ! A high-definition spatiotemporal transcriptomic atlas of mammalian kidney development. Jiang et al. present a spatially resolved #transcriptome atlas at single-cell resolution to explore the establishment and maintenance of #kidney structure in mice…
📢 We are looking for a motivated candidate for a fully funded #PhD to analyze the #transcriptome of polyploid cells from tomato fruit 🍅 at the single cell level #scRNAseq @INRAE_BFP @nathy_go_7 Info here 👇 jobs.inrae.fr/ot-22230
📰| #InstitutesPCUV 🧬🔬I2SysBio co-leads the largest comparative study on methods analyzing data obtained by long-read sequencing of the human #transcriptome. Read more ⬇️ news.pcuv.es/en/home-pcuv-i…
IMPRS retreat kicks off with a great talk by @torbenheick on #RNA turnover and #transcriptome quality control. #science #phdlife
Co-chair @LesleyRGolden @universityofky presenting their work on mid-life #APOE4 to #APOE2 ‘Switching’ alters the cerebral #transcriptome and decreases AD neuropathology #ISMNDNextGen
New in the September issue of #G3journal: @yanjunzan and the team reanalyzed #transcriptome data from thousands of #maize to uncover the genetics underlying maize complex traits, and built a multi-tissue regulatory atlas for functional validation. buff.ly/bQMa6Gs
Measuring natural selection on the #transcriptome 📖 nph.onlinelibrary.wiley.com/doi/10.1111/np… Viewpoint article by Stinchcombe and Kelly @JohnStinchcombe @WileyPlantScience #PlantScience
New in #G3journal: @yanjunzan and the team reanalyzed #transcriptome data from thousands of #maize panels to uncover the genetics underlying maize complex traits, and built a multi-tissue regulatory atlas for functional validation and genomic improvements. buff.ly/lmrsmHC
Carefully planned trajectory analysis using #UMAP embeddings can help identify key #transcriptome changes. In this example from BioRxiv lnkd.in/eMW2xuZu, were we identified IFN expressing CD14+ monocytes associated with high risk. @theMMRF @SinaiImmunol @IcahnMountSinai
#Heterosis works—but how? Liu et al. tackle this question in new research combining #transcriptome, #proteome, #physiological, and heterosis analyses to study #salt response in super hybrid #rice. doi.org/10.1111/jipb.1… @wileyplantsci #PlantSci #JIPB #CropSci
Join us @BioCAT_Poz & @UAM_IBMiB seminar by Evegenia Nitini's @evgenia_ntini from @IMBB_FORTH on the modelling of the nascent #RNA #transcriptome and resulting insights on processing of long non-coding RNAs and #enhancer transcription!
CSO @joebeechem highlights how CosMx scales whole #Transcriptome from 1k to 19k genes with no nonlinearities, still 38nm ±11nm #SpatialBiology resolution. Plus, a 19X gene content increase with only ~2X #TurnAroundTime @brukerspatial #BrukerSpatialBiology #AGBT2025”
Congratulations to @WCMCPathology's Dr. Majd Al Assaad (@MajdAssaad) and colleagues on his oral presentation, "Whole genome and #transcriptome sequencing of a pan #cancer cohort unearths novel therapeutic avenues," at the #aacr2023 Annual Meeting! #WGS @WCMEnglanderIPM
We found that a #biocontrol rhizobacterium responds to the #auxin indole-3-acetic acid by modifying its #transcriptome, increasing toxic compounds resistance, altering c-di-GMP levels and affecting #phage infection. @BlastMeetings @mSystemsJ @CSICdivulga journals.asm.org/doi/10.1128/ms…
Congratulations to Yu Wu @AzzByp on her successful #TIGP PhD defense! Co-advised by @erhminlai & me (and also unofficially by @AdamWu9527), Yu made nice progress on #Agrobacterium #transcriptome. The first part of her thesis is available as a preprint: doi.org/10.1101/2025.0…
New research in #GENETICS provides new insights into the origin and early evolution of de novo genes by leveraging large-scale #transcriptome data from different #Drosophila genotypes. 🪰 Read more: buff.ly/Jwt8jjP
🐟#HighlyViewed paper in 2025 #Transcriptome Analysis of the Effect of Acute #Ammonia Stress on Pseudobagrus ussuriensis Liver Tissue 👉mdpi.com/2410-3888/10/1… 💧#acuteammoniastress #livertissue #transcriptomecharacteristics
💥Excited for the publication: "Integrative #Bioinformatics-Guided Analysis of #Glomerular #Transcriptome Implicates Potential Therapeutic Targets and Pathogenesis Mechanisms in #IgA #Nephropathy" 🔗 brnw.ch/21wX4TW #Biomarkers #Immunology #machinelearning
Researchers establish a full-length #gallbladder #transcriptome atlas using #LongReadSequencing and identify ERBB2 i14e as a novel isoform driving #TumorGrowth and trastuzumab resistance. @sjtu1896 #ERBB2 #antisense #OpenAccess in #STTT: doi.org/10.1038/s41392…
Interested in #phylogenetics using whole #genome/#transcriptome/#proteome data? @C__Hahn and I are very happy to share phylociraptor with you: It facilitates explorative and reproducible phylogenomic analyses of thousands of genes and genomes. Preprint: tinyurl.com/yc4f7v6d
🐟#HighlyViewed paper in 2025 #Transcriptome Analysis of the Effect of Acute #Ammonia Stress on Pseudobagrus ussuriensis Liver Tissue 👉mdpi.com/2410-3888/10/1… 💧#acuteammoniastress #livertissue #transcriptomecharacteristics
Article by @Miriam_science et al @arbona_vicent @rosarivar @CebasPlant @ThePlantJournal @SEBiology @wileyplantsci Specific #ABA-independent #tomato #transcriptome reprogramming under #abiotic stress combination onlinelibrary.wiley.com/doi/10.1111/tp… #PlantSci @BigPurpleTomato @transcriptomes
Centrohelid #heliozoan #transcriptome: no flagellar genes (not surprising) MT-severing proteins and kinesin duplication (cool! probably a role in superfast contraction). Ikeda et al. 2022 10.1111/jeu.12955; picture Ikeda et al. 2020 10.4467/16890027AP.20.001.12157.
We developed LSTrAP-denovo, a pipeline for generating transcriptome atlases for species without a genome. All you have to do is to enter the tax ID of your species of interest... #transcriptome #assembly #CDS
Amazing paper title for an amazing paper: "The swan #genome and #transcriptome, it is not all black and white" #biology #science #evolution #omics 🔗: genomebiology.biomedcentral.com/articles/10.11…
New in @The_InnovationJ! A high-definition spatiotemporal transcriptomic atlas of mammalian kidney development. Jiang et al. present a spatially resolved #transcriptome atlas at single-cell resolution to explore the establishment and maintenance of #kidney structure in mice…
Fabulous & fascinating talk as always by @LucyKornblith at #THOR2023 on the curious case of the platelet in trauma and what’s happening with the platelet #transcriptome - always a delight to learn from you, Lucy!
Co-chair @LesleyRGolden @universityofky presenting their work on mid-life #APOE4 to #APOE2 ‘Switching’ alters the cerebral #transcriptome and decreases AD neuropathology #ISMNDNextGen
Measuring natural selection on the #transcriptome 📖 nph.onlinelibrary.wiley.com/doi/10.1111/np… Viewpoint article by Stinchcombe and Kelly @JohnStinchcombe @WileyPlantScience #PlantScience
#Heterosis works—but how? Liu et al. tackle this question in new research combining #transcriptome, #proteome, #physiological, and heterosis analyses to study #salt response in super hybrid #rice. doi.org/10.1111/jipb.1… @wileyplantsci #PlantSci #JIPB #CropSci
Today @AROMWM come and learn about the #transcriptome and #epigenome of the human #innerear sensory and non-sensory epithelia using @10xGenomics Multiome. Poster SA80 presented by @EmiliaLuca_PhD @Sunnybrook @UofT_OHNS @uoftmedicine @LMP_UofT #ARO2023
💥Excited for the publication: "Integrative #Bioinformatics-Guided Analysis of #Glomerular #Transcriptome Implicates Potential Therapeutic Targets and Pathogenesis Mechanisms in #IgA #Nephropathy" 🔗 brnw.ch/21wX4TW #Biomarkers #Immunology #machinelearning
📢#CallForPapers on Integrative Physiology and Translational-Omics of Exercise and Physical Activity! ow.ly/ZmzX50Px0Yl #transcriptome #microbiome #metabolome #proteome #epigenome #AcademicTwitter
IMPRS retreat kicks off with a great talk by @torbenheick on #RNA turnover and #transcriptome quality control. #science #phdlife
In the next #plenary our invited speaker @anaconesa will discuss the potential and challenges of using single-molecule long-read sequencing for #transcriptome analysis and #genome annotation🧬 Join us to learn more! bit.ly/3qClsB2 @Conesa_Lab @BioGenEurope @i2sysbio
We found that a #biocontrol rhizobacterium responds to the #auxin indole-3-acetic acid by modifying its #transcriptome, increasing toxic compounds resistance, altering c-di-GMP levels and affecting #phage infection. @BlastMeetings @mSystemsJ @CSICdivulga journals.asm.org/doi/10.1128/ms…
📢 We are looking for a motivated candidate for a fully funded #PhD to analyze the #transcriptome of polyploid cells from tomato fruit 🍅 at the single cell level #scRNAseq @INRAE_BFP @nathy_go_7 Info here 👇 jobs.inrae.fr/ot-22230
Congratulations to @WCMCPathology's Dr. Majd Al Assaad (@MajdAssaad) and colleagues on his oral presentation, "Whole genome and #transcriptome sequencing of a pan #cancer cohort unearths novel therapeutic avenues," at the #aacr2023 Annual Meeting! #WGS @WCMEnglanderIPM
New research in #GENETICS provides new insights into the origin and early evolution of de novo genes by leveraging large-scale #transcriptome data from different #Drosophila genotypes. 🪰 Read more: buff.ly/Jwt8jjP
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