TreeGenes
@TreeGenes
A Forest Tree Genome and Phenome Database | Georeferenced Data Integration | Featuring 2,130 Tree Species & Counting | Submit Your Data! #FAIRdata
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Excited to have my latest genome featured in #G3journal!
📢 NEW GENOME ALERT: Researchers at @sbbotanicgarden generated a reference genome of the endangered Gaviota tarplant, Deinandra increscens subsp. villosa, an annual herb endemic to the California coast, to understand potential environmental adaptation. bit.ly/4c4w79U
Join us in our virtual workshop to learn all about #Cartograplant ! Happening tomorrow, June 7th 2024, at 1:00 PM UTC. Register here: forms.gle/uCum8gTDeFdMCW… to attend. @TripalProject @USDA_NIFA @Treesnapapp
❗NEW IN TREEGENES: "Genetic data improves niche model discrimination and alters the direction and magnitude of climate change forecasts" by Bothwell et al (2020) ➡️ See information for 1635 🌲 trees @ treegenesdb.org/tpps/details/T…! ⬅️ #PlantScience #Bioinformatics
Fantastic keynotes, free training workshops, and an exciting science program in a beautiful location! Join us in June! Abstracts are due March 10th!
📢 NEW GENOME ALERT: Researchers at @sbbotanicgarden generated a reference genome of the endangered Gaviota tarplant, Deinandra increscens subsp. villosa, an annual herb endemic to the California coast, to understand potential environmental adaptation. bit.ly/4c4w79U
Recently finished your undergraduate degree? Looking for a job to prepare you with skills & knowledge for a career in plant research & conservation? Apply to one year traineeship (40K salary) at botanic gardens including @MortonArboretum! Please RT atlantabg.org/conservation-r…
For anyone learning or teaching bioinformatics, or if you’re interested in getting started, you may like to check out some of many (>230!) integrated tutorials for the Galaxy bioinformatics platform at training.galaxyproject.org/training-mater… . The Galaxy platform is a free, easy-to-join,…
Galaxy is ecstatic to share a new paper in Nature Biotechnology! Congratulations to all contributing authors, what an outstanding accomplishment! Read now: nature.com/articles/s4158…
New Article: "A designer synthetic chromosome fragment functions in moss" rdcu.be/dxdbV ... redesigned and replaced a 155 kb chromosomal region with synthetic sequence in Physcomitrium patens. The simplified sequence obtains the correct epigenetic landscape.
📝 Have YOU done a study that you'd like to see on #CartograPlant? Go to treegenesdb.org/tpps and upload YOUR genotype, phenotype, and environmental plant #data! #PlantScience #FAIRData #Genomics #DataVisualization #research
TreeGenes is @PAGmeeting #PAG31 and we have a digital tools session on CartograPlant starting at 2:20pm. Join us at the poster as well. Population genomics platform for georeferenced plants. Integrate genotype, phenotype, & enviornment #HPC @gmodproject #FAIRdata @TripalProject
TreeGenes & #CartograPlant will be presenting in #Forest Tree (Sunday) & Digital Tools (Monday) - integrated analytics for #popgen studies - #genotype, #phenotype, & envionmental data for all plants! @TripalProject @gmodproject @fairdata #hpc @usejbrowse #PAG31 @PAGmeeting
🔎Need quick information about a 🌳#tree on #CartograPlant? Just click it on the map to bring up a pop-out with information on 📊 #data source, ⛰️ elevation, and more! #PlantScience #DataScience #Botany #Genomics #Bioinformatics #TreeGenes
🖌️ We've been hard at work redesigning our CartograPlant landing page... take a peek at our progress! 👀 treegenesdb.com/ct
❗️NEW IN TREEGENES: "Genetic signature of the natural #gene pool of Tilia Cordata Mill. in Lithuania: Compound evolutionary and anthropogenic effects" by Darius Danusevičius et al (2021) 🌿 🖥️ See info for 543 #trees at treegenesdb.org/tpps/details/T…! #Genetics #FAIRdata
❗️NEW IN TREEGENES: "Genetic #diversity loss and homogenization in #urban trees: the case of Tilia x europaea in Belgium and the Netherlands" by @AnVandenBroeck et al (2018) 🌿 🖥️ See info for 114 #plants at treegenesdb.org/tpps/details/T…! #fairdata
❗️NEW ON CARTOGRAPLANT: "Worldwide core collections of #tea (Camellia sinensis) based on SSR markers" by Fumiya Taniguchi, Keiko Kimura, Tetsuji Saba, et al. 🌿 🗺️ See 788 #plants at treegenesdb.org/cartogratree?a…! #genes #genotype #theaceae
@UConn_Bioinfo is running a 4 day online workshop on variant detection next week and there are still spaces left. Check it out here: bioinformatics.uconn.edu/cbc-workshops/ and let us know if you have questions.
🌲 Working in CartograPlant but have to step away? Use the "Save Session" tool to save your progress and resume right where you left off at any time! 🌲
📢🚨NEW LAYER ALERT🚨: Check out the #species range map of Arbutus arizonica, newly added into #CartograPlant! See that and more at: treegenesdb.org/cartogratree# 🌲
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