#spatialomics 검색 결과
#SpatialOmics The Spatial Atlas of Human Anatomy (SAHA): A Multimodal Subcellular-Resolution Reference Across Human Organs 15 M cells 100 donors 10 organs Liver Pancreas Bone marrow Lymph node PBMC Prostate Stomach ILeum Colon Appendix CosMX 1k 6k WTA Xenium GeoMx RNAscope…
STAMP Single-Cell Transcriptomics Analysis & Multimodal Profiling through Sequencing-free, Imaging-based #SpatialOmics system CosMx Xenium Single-cell suspension cytospinned to slides 100 ~ >1M cells ⏫cell capture ⏬doublets Able to identify ultra-rare cell population…
scBSP: A fast and accurate tool for identifying spatially variable features from high-resolution spatial omics data. #SpatialOmics #Bioinformatics 🧬 🖥️ academic.oup.com/bioinformatics…
#Day3 of STOC Plant 2025 is kicking off with first keynote from Prof. Robert Henry from @CoEPlantSuccess 🇦🇺 Spatial omics of plants for food security 🪴 🧬 🍱 #STOCPlant2025 #spatialomics #spatiotemporalOmics #omics #plantscience @GlobalPlantGPC @ManuelSpannagl
Kicking off “STOC Plant Drives the New Era of Plant Science🪴 🌾 ”, the 2nd International Plant #Spatiotemporal Omics 🧬 Research #Conference in #Beijing 🇨🇳 Excited to be here and looking forward to connecting with fellow researchers👩🔬 👨🔬 #PlantScience #Omics #STOC
#SpatialOmics #ImagingMassSpec #SpatialTranscriptomics MISTy Multiview Intercellular SpaTial modeling framework bioconductor.org/packages/relea… View/spatial scale-specific feature interactions Intraview - same location (intra-to-multicellulat) Juxtaview - immediate neighborhood…
#SpatialOmics MCMICRO Multiple Choice Microscopy pipeline mcmicro.org Multi-channel whole-slide images▶️ Single-cell data BaSiC▶️Illumination correction ASHLAR-▶️Tile stitch & alignment Coreograph▶️TMA core detection UnMICST Cypository Ilastik S3segmenter▶️…
#SpatialOmics #MyocardialInfarction #MolecularCartography 100-gene + #SeqIF 12-marker + #DeepVisualProteomics 4/24/49/96 h postMI🐭 Endocardial vWF mediates Mɸ infiltr Anti-vWF i.v. reduces Mɸ at endocardial, but not epicardial, core or border, zone, but causes infarct wall…
Excited to share that our latest article on #SpatialOmics in plant science is now published in @TrendsinBiotech — and featured on the cover! 🌱📘 This breakthrough approach maps molecules in plant tissues with precise spatial context, opening new doors for climate-smart,…
Thanks to all who visited us at #APDW2025!✨Ready to advance your GI/hepatology research with our Stereo-seq OMNI v1.1? We're funding innovative projects with our Spatial Discovery Grant. Apply here: bit.ly/4qXVB16 #STOmics #SpatialOmics #FFPE #ResearchGrant
Happy to have contributed to this Voices piece on 'The impact of multi-omics in medicine' and sharing my views. " Thank you @CellRepMed editor Dr. Elisa Panada for this opportunity! #SpatialOmics @MDAndersonNews Read more here: cell.com/cell-reports-m…
Our team effort with @song_xiaofei and @UrogerliMD integrates imaging and transcriptomic from GeoMx, highlighting the sweet ‘spot’ at the sub-cellular level. Thrilled to have many people stopped by, including the @joebeechem @nanostringtech #spatialOmics #MoffittAACR24 @AACR
#SpatialOmics SpatioMark R::Statial Work with Xenium CODEX MIBI-TOF "SpatioMark first quantifies spatial proximity of one cell type to another using either a distance or cell abundance derived spatial proximity metric, denoises for segmentation artefacts, then fits a linear…
📢Now out in @Cancer_Cell #Spatial Multimodal Profiling of #LUAD Evolution from Precursor Lesions🌟 Congrats to incredible team @humam_kadara Fuduan Peng @Yibo_Dai @Squirrel_PhD @warapen Data & code available #SpatialOmics #Inflammation #Niche #Prevention cell.com/cancer-cell/fu…
🙌Hey @utswcancer @UTSWCancerBio @UTSWHemeOnc @UTSWscience @UTSW_pathology, don't miss our next #KomenBreastCancerForum featuring Dr. Jasmine Plummer @DrJasPlummer @StJude *in person* Weds, May 17! hosted by @hmcarthur #TNBC #SpatialOmics
📢It’s now out in @NatureGenet! 🎉Congratulations to our amazing team @Yibo_Dai @GreenLymphoLab and wonderful collaborators @MDAndersonNews #SpatialOmics #TME #inflammatory niches 🌟Data & Code are publicly available nature.com/articles/s4158…
Student Success Alert! Innovation is driven by our hardworking, smart, and dedicated students. Happy to announce our students' awards in our lab! Congrats to: Mayar Allam Sandip Das Thaddeus M. Anirudh Sriram Neel Sarkar @CoulterBME @ahmetcoskun_lab #spatialomics
In my latest for @GENBiotechJrnl, I write about what #SpatialOmics is revealing about the players in the tumor microenvironment. Learn about how this is unraveling tumor heterogeneity and offering important clinical insights. liebertpub.com/doi/10.1089/ge…
Having trouble analyzing large-scale #spatialomics data? SEraster, a rasterization preprocessing framework on #Rstats that aggregates cellular information into spatial pixels for scalable analysis, is now published on Bioinformatics! Paper: doi.org/10.1093/bioinf… 🧵👇 1/n
#SpatialOmics #ChronicLimbThreateningIschemia #Diabetes Anterior Tibial Artery #Amputation scRNAseq n=4 #SpatialTranscriptomics Visium n=4 #SpatialMetabolomics #ImagingMassSpec n=7 RCTD integrates scRNA with Visium (wish a better interpretation of spatially-resolved arterial…
Location matters. 📍In Rectal Cancer, spatial proximity defines outcome. New in Cancer Cell: #StereoSeq reveals that T cell & EC co-localization drives 64% Complete Remission in TNT therapy. 📉See the proof:👉 bit.ly/44MFCJR #SpatialOmics #STOmics
Our new Customer Experience Center in #Singapore is now open—marking MGI’s first CEC in Southeast Asia! 🎉 Learn more in our press release: global-mgitech.com/cec-singapore/ Quick tour at our SG CEC: youtu.be/9dD2Dg_krJw #Genomics #SpatialOmics #InnovationHub #Biotech
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MGI Singapore CEC Now Open!
Smart spatial omics (S²-omics) enhances ROI selection in spatial omics, optimizing molecular heterogeneity capture in tissues. #SpatialOmics PMID:41298871, Nat Cell Biol 2025, @NatureCellBio @UTHealthHouston doi.org/10.1038/s41556… #AI #Pharma #BioMed #RNA #ASHG #ESHG
#Day3 of STOC Plant 2025 is kicking off with the second keynote by @ManuelSpannagl from @MU_CCFI_Biotech @MurdochUni 🇦🇺 Pan-Multi-Omics in Wheat: what can we learn? 🪴 🧬 🍱 #STOCPlant2025 #spatialomics #spatiotemporalOmics #omics #plantscience #PanOmics #Pangenome
#Day3 of STOC Plant 2025 is kicking off with first keynote from Prof. Robert Henry from @CoEPlantSuccess 🇦🇺 Spatial omics of plants for food security 🪴 🧬 🍱 #STOCPlant2025 #spatialomics #spatiotemporalOmics #omics #plantscience @GlobalPlantGPC @ManuelSpannagl
#Day3 of STOC Plant 2025 is kicking off with first keynote from Prof. Robert Henry from @CoEPlantSuccess 🇦🇺 Spatial omics of plants for food security 🪴 🧬 🍱 #STOCPlant2025 #spatialomics #spatiotemporalOmics #omics #plantscience @GlobalPlantGPC @ManuelSpannagl
Kicking off “STOC Plant Drives the New Era of Plant Science🪴 🌾 ”, the 2nd International Plant #Spatiotemporal Omics 🧬 Research #Conference in #Beijing 🇨🇳 Excited to be here and looking forward to connecting with fellow researchers👩🔬 👨🔬 #PlantScience #Omics #STOC
Thanks to all who visited us at #APDW2025!✨Ready to advance your GI/hepatology research with our Stereo-seq OMNI v1.1? We're funding innovative projects with our Spatial Discovery Grant. Apply here: bit.ly/4qXVB16 #STOmics #SpatialOmics #FFPE #ResearchGrant
Weekly reads 17/11/25 New rules of life: gene editing, neuro-immune niches, AI models and anti-tumor synergy open.substack.com/pub/behindtheb… #SingleCell #SpatialOmics #CancerResearch #CRISPR #Aging #SystemsBiology #Immunotherapy
STAMP Single-Cell Transcriptomics Analysis & Multimodal Profiling through Sequencing-free, Imaging-based #SpatialOmics system CosMx Xenium Single-cell suspension cytospinned to slides 100 ~ >1M cells ⏫cell capture ⏬doublets Able to identify ultra-rare cell population…
scBSP: A fast and accurate tool for identifying spatially variable features from high-resolution spatial omics data. #SpatialOmics #Bioinformatics 🧬 🖥️ academic.oup.com/bioinformatics…
#SpatialOmics The Spatial Atlas of Human Anatomy (SAHA): A Multimodal Subcellular-Resolution Reference Across Human Organs 15 M cells 100 donors 10 organs Liver Pancreas Bone marrow Lymph node PBMC Prostate Stomach ILeum Colon Appendix CosMX 1k 6k WTA Xenium GeoMx RNAscope…
#Day3 of STOC Plant 2025 is kicking off with first keynote from Prof. Robert Henry from @CoEPlantSuccess 🇦🇺 Spatial omics of plants for food security 🪴 🧬 🍱 #STOCPlant2025 #spatialomics #spatiotemporalOmics #omics #plantscience @GlobalPlantGPC @ManuelSpannagl
Kicking off “STOC Plant Drives the New Era of Plant Science🪴 🌾 ”, the 2nd International Plant #Spatiotemporal Omics 🧬 Research #Conference in #Beijing 🇨🇳 Excited to be here and looking forward to connecting with fellow researchers👩🔬 👨🔬 #PlantScience #Omics #STOC
I very much enjoyed working with editor @GaalBernadett and brilliant peers @fabian_theis @Danidiin @roserventotormo @mssanjavickovic @ltkagohara @afrendeiro @Johanna_A_Joyce on this Voices piece @CellSystemsCP check it out: doi.org/10.1016/j.cels… @MDAndersonNews #SpatialOmics
Mind blowing development in single cell mass spec proteomics!!! Impressive talk by Matthias @labs_mann at @VIBConferences #SpatialOmics conference!
Happy to have contributed to this Voices piece on 'The impact of multi-omics in medicine' and sharing my views. " Thank you @CellRepMed editor Dr. Elisa Panada for this opportunity! #SpatialOmics @MDAndersonNews Read more here: cell.com/cell-reports-m…
A presentation on the new @curiobio SEEKER for #spatialomics. A tile of the size 3x3mm now, but 10x10mm coming.
🙌Hey @utswcancer @UTSWCancerBio @UTSWHemeOnc @UTSWscience @UTSW_pathology, don't miss our next #KomenBreastCancerForum featuring Dr. Jasmine Plummer @DrJasPlummer @StJude *in person* Weds, May 17! hosted by @hmcarthur #TNBC #SpatialOmics
Thanks to all who visited us at #APDW2025!✨Ready to advance your GI/hepatology research with our Stereo-seq OMNI v1.1? We're funding innovative projects with our Spatial Discovery Grant. Apply here: bit.ly/4qXVB16 #STOmics #SpatialOmics #FFPE #ResearchGrant
#SpatialOmics MCMICRO Multiple Choice Microscopy pipeline mcmicro.org Multi-channel whole-slide images▶️ Single-cell data BaSiC▶️Illumination correction ASHLAR-▶️Tile stitch & alignment Coreograph▶️TMA core detection UnMICST Cypository Ilastik S3segmenter▶️…
#SpatialOmics #ChronicLimbThreateningIschemia #Diabetes Anterior Tibial Artery #Amputation scRNAseq n=4 #SpatialTranscriptomics Visium n=4 #SpatialMetabolomics #ImagingMassSpec n=7 RCTD integrates scRNA with Visium (wish a better interpretation of spatially-resolved arterial…
Student Success Alert! Innovation is driven by our hardworking, smart, and dedicated students. Happy to announce our students' awards in our lab! Congrats to: Mayar Allam Sandip Das Thaddeus M. Anirudh Sriram Neel Sarkar @CoulterBME @ahmetcoskun_lab #spatialomics
Very happy to kick off this course on #SpatialOmics and #MultiplexedImageAnalysis with @DenisSchapiro Victor Perez and @miguelib93
SpatialData spatialdata.scverse.org/en/latest/ Establish a global common coordinate framework-> Multi-modal #SpatialOmics integration Align multislice for 3D #SpatialOmics napari-spatialdata Work with (RNA) Visium Xenium CosMx MEFISH (protein) CycIF MIBI-TOF #ImagingMassCytometry +HE…
Excited to share that our latest article on #SpatialOmics in plant science is now published in @TrendsinBiotech — and featured on the cover! 🌱📘 This breakthrough approach maps molecules in plant tissues with precise spatial context, opening new doors for climate-smart,…
🧐Interested in #SpatialOmics? ‼️‼️Registrations are now open for our 3-day course on Spatial Omics data analysis with R/Bioconductor in May: physalia-courses.org/courses-worksh… 🚀🚀Instructors: @steman_research & @LGMartelotto
Thrilled to see my friends @JulioSaezRod @DenisSchapiro at @UniHeidelberg. We chat for 3 hours and a lot of cool ideas! Go #spatialomics 😎😎
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