#spatialtranscriptomics arama sonuçları

Accurately deciphering the spatial gene expression characteristics of individual cells represents a core demand in spatial transcriptomics research. #SpatialTranscriptomics #CellSegmentationTech #SpatialOmics #SingleCellSpatialExpression

Unlocking the true power of precision therapeutics: Spatial RNA medicine maps gene expression within tissues to target treatments exactly where they're needed. 🧬🔬 Curious how this changes drug design? Read more: news-medical.net/life-sciences/… #PrecisionMedicine #SpatialTranscriptomics

#SpatialTranscriptomics Visium @10xGenomics Tuberous sclerosis complex-associated Renal Angiomyolipoma (n=1) vs sporadic AML (n=1) vs Renal Cell Carcinoma (n=1) Melanocytic traits in AML MITF MLANA PMEL @RyutaWatanab999 @SciReports 2025 nature.com/articles/s4159…

This review presents spatial transcriptomics as a key tool in cancer research, preserving tissue-level RNA localization to reveal tumor heterogeneity and microenvironment interactions. doi.org/10.1007/s44272… #SpatialTranscriptomics

To truly understand biology, researchers need to connect data to meaning. Spatial molecular imaging combines transcriptomic insights with spatial context. Explore more about the value of high-resolution spatial molecular imaging👉 bit.ly/4ay8A3M #SpatialTranscriptomics

Comparative analysis of commercial Imaging-based #SpatialTranscriptomics methods Xenium CosMx 1k MERSCOPE Tissue Microarray 17 tumors + 16 normal tissues Transcript count Corr. with reference bulk TCGA GTEx RNAseq or scRNAseq Segmentation (Precision Recall F1 score) Accuracy:…

🧬 See Every Gene in Place Without Sequencing! 🔍 New tech enables whole-genome spatial transcriptomics at single-molecule resolution without sequencing. #SpatialTranscriptomics #SingleMolecule #Genomics #ImagingTech #OmicsInnovation #PrecisionBiolo cell.com/cell/fulltext/…

Registrations are now open for our brand-new course on Spatial Transcriptomics, taught by Tancredi Pentimalli from the Max Delbrück Center in Berlin. 👉 Check it out: physalia-courses.org/courses-worksh… #SpatialTranscriptomics

Roots are the anchor of life! 🔍🌱STOmics Stereo-seq, in @MolecularPlant, maps HMGB1 to root sclerenchyma cells—unlocking genetic secrets for drought resistance & next-gen precision breeding.🔗 doi.org/10.1016/j.molp… #SpatialTranscriptomics #Rice #PlantSci #AgriTech

🚨New #SpatialTranscriptomics #Bioinformatics data resource out in @naturemethods. SODB, a platform with >2,400 manually curated spatial experiments from >25 spatial omics technologies & interactive analytical modules. This🧵will walk you through all the features of SODB [1/33]

Systematic comparisons among 4 subcellular-resolution #SpatialTranscriptomics methods Stereo-seq v1.3 Visium HD FFPE CosMx 6k Xenium 5k Human Tumors Ground truth CODEX, +scRNAseq Gene detection sensitivity (CosMx performance...🙁) (Spatial) false positives Transcript-protein…

Ruochen Dong, @linheng_li lab, gave an outstanding presentation on using #SpatialTranscriptomics to interrogate HSC-niche interaction in the mouse fetal liver at #ISSCR2023. He also received merit and travel awards. Congratulations! @ISSCR

Excited to share our #SingleCell and #SpatialTranscriptomics analysis of #ExerciseTraining remodeling of #WhiteAdiposeTissue through innervation, vascularization, and #ExtracellularMatrix in mouse and human with #LaurieGoodyear #JanWillemMiddelbeek @PasqualeNigro9 @MVamvini…

New kid in town #spatialtranscriptomics @10xGenomics

#spatialtranscriptomics of sleep deprivation this afternoon #sfn Check out our recently published paper! nature.com/articles/s4146…

#WernerSyndrome hiPSC-derived engineered vessel #SpatialTranscriptomics #Visium @10xGenomics + #Metabolomics▶️ #BranchedChainKetoAcid⬇️ #MonohydroxyFattyAcid⬆️ in Werner vessels with traits of #PrematureAging Aligned #SmoothMuscleCell in Collagen hydrogel➡️ Roll-up around φ…

How do we uncover cell-cell interactions from #SpatialTranscriptomics data? Excited to share Niche-DE (doi.org/10.1186/s13059…). Niche-DE asks how does a cell’s transcriptome depend on its spatial neighbors, by identifying Niche-Differentially Expressed genes. 1/9

#SpatialTranscriptomics Visium @10xGenomics Tuberous sclerosis complex-associated Renal Angiomyolipoma (n=1) vs sporadic AML (n=1) vs Renal Cell Carcinoma (n=1) Melanocytic traits in AML MITF MLANA PMEL @RyutaWatanab999 @SciReports 2025 nature.com/articles/s4159…

OmiCLIP #Visualomics github.com/GuangyuWangLab… An amazing Histology (HE) - #SpatialTranscriptomics foundation model Contrastive Learning: Image encoder + Gene/Text encoder Not Generative yet Building an ST-bank of 2.2 M image-Visium pairs in 1007 tissue samples, 32 organs Work…

#SpatialTranscriptomics Human Embryonic Heart 8.4 9.7 pcw Visium @10xGenomics +snRNAseq Contrast to vessel-nerve alignment, aortic valve leaflet is encircled but not invaded by nerve sprouts⬅️ 🧐Repulsive signals from #ValvularInterstitialCell #ValvularEndothelialCell (#EndMT)?…

We are very very VERY excited to be running #cosmx #singlecell #spatialtranscriptomics experiments in @UofGlasgow @UofGCancerSci @UofGMVLS Well done to the @LabSpatialNBJ team @nanostringtech

CoCo-ST detects global and local biological structures in spatial transcriptomics datasets. #SpatialTranscriptomics #VarianceIdentification @NatureCellBio nature.com/articles/s4155…

We’re all wondering what the future of #spatialtranscriptomics (ST) has in store. Well, I think the near future will look a lot like the new 6000-plex dataset reviewed here (link to the original source at the end of this post). SAMPLE An entire 100 mm² intact 5 µm FFPE section…

Excellent talk from @Sandy_Figiel in @Uroweb #EAUlab session at #EAU25 presenting our cool data (I'm bias!) on #SpatialTranscriptomics & #ClonalAnalysis to detect unique features of metastasing clones in #ProstateCancer. @OxPCaBiol #SPACE_Study #3DLightsheet

Comparative analysis of commercial Imaging-based #SpatialTranscriptomics methods Xenium CosMx 1k MERSCOPE Tissue Microarray 17 tumors + 16 normal tissues Transcript count Corr. with reference bulk TCGA GTEx RNAseq or scRNAseq Segmentation (Precision Recall F1 score) Accuracy:…

"We all love the pretty pictures we get from #SpatialTranscriptomics but the real value lies in the ability to precisely determine the cellular composition & cell-cell relationships - not possible with bulk RNA or even scRNA approaches" 💯% well said @bayraktar_lab! 👏 #FoG2025

Comparing single-cell #SpatialTranscriptomics methods on FFPE human tumor #TissueMicroArray CosMx 1k vs MERFISH 500 vs Xenium-UM/-MM 339 93 common genes lung adenocarcinoma pleural mesothelioma Corr. Bulk RNAseq, GeoMx "better F1-scores with Xenium-MM (median, > 75%) than…

Vispro improves imaging analysis for Visium spatial transcriptomics.#SpatialTranscriptomics #Visium #ImageProcessing #Bioinformatics #Genomics @GenomeBiology genomebiology.biomedcentral.com/articles/10.11…

[ENG] The @NeuroAlc and #IzasaScientifics have joined forces to bring #SpatialTranscriptomics #MERFISH to Spain💪 It’s the first device that offers this technology in the Iberian Peninsula and is located at the IN Omics Facility. More info here👇 in.umh-csic.es/en/el-institut… #MERSCOPE